Genome-wide analysis of human long noncoding RNAs: a provocative review

CP Ponting, W Haerty - Annual review of genomics and human …, 2022 - annualreviews.org
Do long noncoding RNAs (lncRNAs) contribute little or substantively to human biology? To
address how lncRNA loci and their transcripts, structures, interactions, and functions …

[HTML][HTML] Maternal selection of human embryos in early gestation: insights from recurrent miscarriage

JJ Brosens, PR Bennett, VM Abrahams… - Seminars in cell & …, 2022 - Elsevier
Compared to most mammals, human pregnancy is unusual in that it involves chromosomally
diverse embryos, cyclical breakdown and regeneration of the uterine mucosa, and intimate …

The sequences of 150,119 genomes in the UK Biobank

BV Halldorsson, HP Eggertsson, KHS Moore… - Nature, 2022 - nature.com
Detailed knowledge of how diversity in the sequence of the human genome affects
phenotypic diversity depends on a comprehensive and reliable characterization of both …

Relating pathogenic loss-of-function mutations in humans to their evolutionary fitness costs

I Agarwal, ZL Fuller, SR Myers, M Przeworski - Elife, 2023 - elifesciences.org
Causal loss-of-function (LOF) variants for Mendelian and severe complex diseases are
enriched in'mutation intolerant'genes. We show how such observations can be interpreted in …

Using computational simulations to model deleterious variation and genetic load in natural populations

CC Kyriazis, JA Robinson… - The American …, 2023 - journals.uchicago.edu
Deleterious genetic variation is abundant in wild populations, and understanding the
ecological and conservation implications of such variation is an area of active research …

A mutation rate model at the basepair resolution identifies the mutagenic effect of polymerase III transcription

V Seplyarskiy, EM Koch, DJ Lee, JS Lichtman… - Nature Genetics, 2023 - nature.com
De novo mutations occur at substantially different rates depending on genomic location,
sequence context and DNA strand. The success of methods to estimate selection intensity …

A quantitative genetic model of background selection in humans

V Buffalo, AD Kern - Plos Genetics, 2024 - journals.plos.org
Author summary Across the human genome, there are large-scale fluctuations in genetic
diversity caused by the indirect effects of selection. This “linked selection signal” reflects the …

[HTML][HTML] Long noncoding RNAs in cardiovascular disease

A Kohlmaier, LM Holdt, D Teupser - Current opinion in cardiology, 2023 - journals.lww.com
Summary lncRNA research is passing the stage of enumerating lncRNAs or recording
simplified on-off expression switches. Mechanistic analyses are starting to reveal …

Perfect and imperfect views of ultraconserved sequences

V Snetkova, LA Pennacchio, A Visel… - Nature Reviews …, 2022 - nature.com
Across the human genome, there are nearly 500 'ultraconserved'elements: regions of at
least 200 contiguous nucleotides that are perfectly conserved in both the mouse and rat …

Meiotic and mitotic aneuploidies drive arrest of in vitro fertilized human preimplantation embryos

RC McCoy, MC Summers, A McCollin, CS Ottolini… - Genome medicine, 2023 - Springer
Background The high incidence of aneuploidy in early human development, arising either
from errors in meiosis or postzygotic mitosis, is the primary cause of pregnancy loss …