Physics-informed machine learning
Despite great progress in simulating multiphysics problems using the numerical
discretization of partial differential equations (PDEs), one still cannot seamlessly incorporate …
discretization of partial differential equations (PDEs), one still cannot seamlessly incorporate …
Opportunities and obstacles for deep learning in biology and medicine
T Ching, DS Himmelstein… - Journal of the …, 2018 - royalsocietypublishing.org
Deep learning describes a class of machine learning algorithms that are capable of
combining raw inputs into layers of intermediate features. These algorithms have recently …
combining raw inputs into layers of intermediate features. These algorithms have recently …
E (n) equivariant graph neural networks
VG Satorras, E Hoogeboom… - … conference on machine …, 2021 - proceedings.mlr.press
This paper introduces a new model to learn graph neural networks equivariant to rotations,
translations, reflections and permutations called E (n)-Equivariant Graph Neural Networks …
translations, reflections and permutations called E (n)-Equivariant Graph Neural Networks …
Gemnet: Universal directional graph neural networks for molecules
J Gasteiger, F Becker… - Advances in Neural …, 2021 - proceedings.neurips.cc
Effectively predicting molecular interactions has the potential to accelerate molecular
dynamics by multiple orders of magnitude and thus revolutionize chemical simulations …
dynamics by multiple orders of magnitude and thus revolutionize chemical simulations …
Understanding and mitigating gradient flow pathologies in physics-informed neural networks
The widespread use of neural networks across different scientific domains often involves
constraining them to satisfy certain symmetries, conservation laws, or other domain …
constraining them to satisfy certain symmetries, conservation laws, or other domain …
Geom-gcn: Geometric graph convolutional networks
Message-passing neural networks (MPNNs) have been successfully applied to
representation learning on graphs in a variety of real-world applications. However, two …
representation learning on graphs in a variety of real-world applications. However, two …
Distance encoding: Design provably more powerful neural networks for graph representation learning
Learning representations of sets of nodes in a graph is crucial for applications ranging from
node-role discovery to link prediction and molecule classification. Graph Neural Networks …
node-role discovery to link prediction and molecule classification. Graph Neural Networks …
Analyzing learned molecular representations for property prediction
Advancements in neural machinery have led to a wide range of algorithmic solutions for
molecular property prediction. Two classes of models in particular have yielded promising …
molecular property prediction. Two classes of models in particular have yielded promising …
Identity-aware graph neural networks
Abstract Message passing Graph Neural Networks (GNNs) provide a powerful modeling
framework for relational data. However, the expressive power of existing GNNs is upper …
framework for relational data. However, the expressive power of existing GNNs is upper …
Improving graph neural network expressivity via subgraph isomorphism counting
While Graph Neural Networks (GNNs) have achieved remarkable results in a variety of
applications, recent studies exposed important shortcomings in their ability to capture the …
applications, recent studies exposed important shortcomings in their ability to capture the …