RecBCD enzyme and the repair of double-stranded DNA breaks

MS Dillingham, SC Kowalczykowski - Microbiology and Molecular …, 2008 - Am Soc Microbiol
SUMMARY The RecBCD enzyme of Escherichia coli is a helicase-nuclease that initiates the
repair of double-stranded DNA breaks by homologous recombination. It also degrades …

Non-hexameric DNA helicases and translocases: mechanisms and regulation

TM Lohman, EJ Tomko, CG Wu - Nature Reviews Molecular Cell …, 2008 - nature.com
Helicases and nucleic acid translocases are motor proteins that have essential roles in
nearly all aspects of nucleic acid metabolism, ranging from DNA replication to chromatin …

Diffusion of human replication protein A along single-stranded DNA

B Nguyen, J Sokoloski, R Galletto, EL Elson… - Journal of molecular …, 2014 - Elsevier
Replication protein A (RPA) is a eukaryotic single-stranded DNA (ssDNA) binding protein
that plays critical roles in most aspects of genome maintenance, including replication …

Förster resonance energy transfer and protein-induced fluorescence enhancement as synergetic multi-scale molecular rulers

E Ploetz, E Lerner, F Husada, M Roelfs, SY Chung… - Scientific reports, 2016 - nature.com
Advanced microscopy methods allow obtaining information on (dynamic) conformational
changes in biomolecules via measuring a single molecular distance in the structure. It is …

Spectroscopic studies of position-specific DNA 'breathing'fluctuations at replication forks and primer-template junctions

D Jose, K Datta, NP Johnson, PH von Hippel - Biophysical Journal, 2009 - cell.com
344a Monday, March 2, 2009 occurs at these ss-dsDNA junctions and the physiological
consequences of this 'breathing'is not well understood, in part because it has been difficult to …

The processing of double-stranded DNA breaks for recombinational repair by helicase–nuclease complexes

JTP Yeeles, MS Dillingham - DNA repair, 2010 - Elsevier
Double-stranded DNA breaks are prepared for recombinational repair by nucleolytic
digestion to form single-stranded DNA overhangs that are substrates for RecA/Rad51 …

DNA binding to RecD: role of the 1B domain in SF1B helicase activity

K Saikrishnan, SP Griffiths, N Cook, R Court… - The EMBO …, 2008 - embopress.org
The molecular mechanism of superfamily 1Bα helicases remains unclear. We present here
the crystal structure of the RecD2 helicase from Deinococcus radiodurans at 2.2‐Å …

Homologous recombination—enzymes and pathways

B Michel, D Leach - EcoSal Plus, 2012 - Am Soc Microbiol
Homologous recombination is an ubiquitous process that shapes genomes and repairs DNA
damage. The reaction is classically divided into three phases: presynaptic, synaptic, and …

Mechanism for nuclease regulation in RecBCD

M Wilkinson, Y Chaban, DB Wigley - Elife, 2016 - elifesciences.org
In bacterial cells, processing of double-stranded DNA breaks for repair by homologous
recombination is catalysed by AddAB, AdnAB or RecBCD-type helicase-nucleases. These …

Insights into Chi recognition from the structure of an AddAB‐type helicase–nuclease complex

K Saikrishnan, JT Yeeles, NS Gilhooly… - The EMBO …, 2012 - embopress.org
In bacterial cells, processing of double‐stranded DNA breaks for repair by homologous
recombination is dependent upon the recombination hotspot sequence Chi and is catalysed …