Diagnostics and analysis of SARS-CoV-2: current status, recent advances, challenges and perspectives

T Dong, M Wang, J Liu, P Ma, S Pang, W Liu… - Chemical Science, 2023 - pubs.rsc.org
The disastrous spread of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
has induced severe public healthcare issues and weakened the global economy …

Interaction of SARS-CoV-2 with host cells and antibodies: experiment and simulation

H Nguyen, HL Nguyen, PD Lan, NQ Thai… - Chemical Society …, 2023 - pubs.rsc.org
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is the causative agent of
the devastating global COVID-19 pandemic announced by WHO in March 2020. Through …

Structural basis of human ACE2 higher binding affinity to currently circulating Omicron SARS-CoV-2 sub-variants BA. 2 and BA. 1.1

L Li, H Liao, Y Meng, W Li, P Han, K Liu, Q Wang, D Li… - Cell, 2022 - cell.com
The currently circulating Omicron sub-variants are the SARS-CoV-2 strains with the highest
number of known mutations. Herein, we found that human angiotensin-converting enzyme 2 …

AIMD-Chig: Exploring the conformational space of a 166-atom protein Chignolin with ab initio molecular dynamics

T Wang, X He, M Li, B Shao, TY Liu - Scientific Data, 2023 - nature.com
Molecular dynamics (MD) simulations have revolutionized the modeling of biomolecular
conformations and provided unprecedented insight into molecular interactions. Due to the …

Are nutraceuticals effective in COVID-19 and post-COVID prevention and treatment?

A Catalano, D Iacopetta, J Ceramella, ACD Maio… - Foods, 2022 - mdpi.com
The beginning of the end or the end of the beginning? After two years mastered by
coronavirus disease 19 (COVID-19) pandemic, we are now witnessing a turnaround. The …

Electrostatic interactions are the primary determinant of the binding affinity of SARS-CoV-2 spike RBD to ACE2: A computational case study of omicron variants

P Sang, YQ Chen, MT Liu, YT Wang, T Yue… - International Journal of …, 2022 - mdpi.com
To explore the mechanistic origin that determines the binding affinity of SARS-CoV-2 spike
receptor binding domain (RBD) to human angiotensin converting enzyme 2 (ACE2), we …

SELEX based aptamers with diagnostic and entry inhibitor therapeutic potential for SARS-CoV-2

S Halder, A Thakur, SS Keshry, P Jana, D Karothia… - Scientific Reports, 2023 - nature.com
Frequent mutation and variable immunological protection against vaccination is a common
feature for COVID-19 pandemic. Early detection and confinement remain key to controlling …

Structural definition of HLA class II-presented SARS-CoV-2 epitopes reveals a mechanism to escape pre-existing CD4+ T cell immunity

Y Chen, GH Mason, DO Scourfield… - Cell Reports, 2023 - cell.com
CD4+ T cells recognize a broad range of peptide epitopes of severe acute respiratory
syndrome coronavirus 2 (SARS-CoV-2), which contribute to immune memory and limit …

A mosaic-type trimeric RBD-based COVID-19 vaccine candidate induces potent neutralization against Omicron and other SARS-CoV-2 variants

J Zhang, ZB Han, Y Liang, XF Zhang, YQ Jin, LF Du… - Elife, 2022 - elifesciences.org
Large-scale populations in the world have been vaccinated with COVID-19 vaccines,
however, breakthrough infections of SARS-CoV-2 are still growing rapidly due to the …

Interactions between heparin and SARS-CoV-2 spike glycoprotein RBD from omicron and other variants

AL Gelbach, F Zhang, SJ Kwon, JT Bates… - Frontiers in Molecular …, 2022 - frontiersin.org
Heparan sulfate (HS) acts as a co-receptor of angiotensin-converting enzyme 2 (ACE2) by
interacting with severe acute respiratory syndrome-related coronavirus 2 (SARS-CoV-2) …