Real‐time genomics for One Health
The ongoing degradation of natural systems and other environmental changes has put our
society at a crossroad with respect to our future relationship with our planet. While the …
society at a crossroad with respect to our future relationship with our planet. While the …
Respiratory metagenomics: route to routine service
JD Edgeworth - Current Opinion in Infectious Diseases, 2023 - journals.lww.com
Pathogen sequencing is a transformational proposition for microbiology laboratories and
their infectious diseases, infection control, and public health partners. Healthcare systems …
their infectious diseases, infection control, and public health partners. Healthcare systems …
Metagenomic prediction of antimicrobial resistance in critically ill patients with lower respiratory tract infections
Background Antimicrobial resistance (AMR) is rising at an alarming rate and complicating
the management of infectious diseases including lower respiratory tract infections (LRTI) …
the management of infectious diseases including lower respiratory tract infections (LRTI) …
[HTML][HTML] The ongoing Streptococcus pyogenes (Group A Streptococcus) outbreak in London, United Kingdom, in December 2022: a molecular epidemiology study
A Alcolea-Medina, LB Snell, C Alder… - Clinical Microbiology …, 2023 - Elsevier
Objectives Epidemiological and whole-genome sequencing analysis of an ongoing
outbreak of Streptococcus pyogenes (Group A Streptococcus) in London (United Kingdom) …
outbreak of Streptococcus pyogenes (Group A Streptococcus) in London (United Kingdom) …
Drug resistance and vaccine target surveillance of Plasmodium falciparum using nanopore sequencing in Ghana
ST Girgis, E Adika, FE Nenyewodey… - Nature …, 2023 - nature.com
Malaria results in over 600,000 deaths annually, with the highest burden of deaths in young
children living in sub-Saharan Africa. Molecular surveillance can provide important …
children living in sub-Saharan Africa. Molecular surveillance can provide important …
Clinical application and evaluation of metagenomic next-generation sequencing in pathogen detection for suspected central nervous system infections
L Yuan, XY Zhu, LM Lai, Q Chen, Y Liu, R Zhao - Scientific Reports, 2024 - nature.com
Abstract Central nervous system Infections (CNSIs) is a disease characterized by complex
pathogens, rapid disease progression, high mortality rate and high disability rate. Here, we …
pathogens, rapid disease progression, high mortality rate and high disability rate. Here, we …
Molecular signature of postmortem lung tissue from COVID-19 patients suggests distinct trajectories driving mortality
To elucidate the molecular mechanisms that manifest lung abnormalities during severe
acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infections, we performed whole …
acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infections, we performed whole …
Nanopore sequencing technology and its applications
P Zheng, C Zhou, Y Ding, B Liu, L Lu, F Zhu… - MedComm, 2023 - Wiley Online Library
Since the development of Sanger sequencing in 1977, sequencing technology has played a
pivotal role in molecular biology research by enabling the interpretation of biological genetic …
pivotal role in molecular biology research by enabling the interpretation of biological genetic …
Unified metagenomic method for rapid detection of microorganisms in clinical samples
A Alcolea-Medina, C Alder, LB Snell… - Communications …, 2024 - nature.com
Background Clinical metagenomics involves the genomic sequencing of all microorganisms
in clinical samples ideally after depletion of human DNA to increase sensitivity and reduce …
in clinical samples ideally after depletion of human DNA to increase sensitivity and reduce …
A dual-process of targeted and unbiased Nanopore sequencing enables accurate and rapid diagnosis of lower respiratory infections
Y Guo, Z Li, L Li, S Li, L Sun, X Yang, Y Dai, J Gu… - …, 2023 - thelancet.com
Background Nanopore metagenomics has been used for infectious disease diagnosis for
bacterial pathogens. However, this technology currently lacks comprehensive performance …
bacterial pathogens. However, this technology currently lacks comprehensive performance …