Experimental evolution

TJ Kawecki, RE Lenski, D Ebert, B Hollis… - Trends in ecology & …, 2012 - cell.com
Experimental evolution is the study of evolutionary processes occurring in experimental
populations in response to conditions imposed by the experimenter. This research approach …

Is evolvability evolvable?

M Pigliucci - Nature Reviews Genetics, 2008 - nature.com
In recent years, biologists have increasingly been asking whether the ability to evolve—the
evolvability—of biological systems, itself evolves, and whether this phenomenon is the result …

The surprising creativity of digital evolution: A collection of anecdotes from the evolutionary computation and artificial life research communities

J Lehman, J Clune, D Misevic, C Adami, L Altenberg… - Artificial life, 2020 - direct.mit.edu
Evolution provides a creative fount of complex and subtle adaptations that often surprise the
scientists who discover them. However, the creativity of evolution is not limited to the natural …

Avida: A software platform for research in computational evolutionary biology

C Ofria, CO Wilke - Artificial life, 2004 - ieeexplore.ieee.org
Avida is a software platform for experiments with self-replicating and evolving computer
programs. It provides detailed control over experimental settings and protocols, a large array …

Robustness and evolvability

J Masel, MV Trotter - Trends in Genetics, 2010 - cell.com
Why isn't random variation always deleterious? Are there factors that sometimes make
adaptation easier? Biological systems are extraordinarily robust to perturbation by …

The evolution of sex: empirical insights into the roles of epistasis and drift

JAGM De Visser, SF Elena - Nature Reviews Genetics, 2007 - nature.com
Despite many years of theoretical and experimental work, the explanation for why sex is so
common as a reproductive strategy continues to resist understanding. Recent empirical work …

The causes of epistasis

JAGM De Visser, TF Cooper… - Proceedings of the …, 2011 - royalsocietypublishing.org
Since Bateson's discovery that genes can suppress the phenotypic effects of other genes,
gene interactions—called epistasis—have been the topic of a vast research effort. Systems …

New insights into bacterial adaptation through in vivo and in silico experimental evolution

T Hindré, C Knibbe, G Beslon… - Nature Reviews …, 2012 - nature.com
Microbiology research has recently undergone major developments that have led to great
progress towards obtaining an integrated view of microbial cell function. Microbial genetics …

The emergence of modularity in biological systems

DM Lorenz, A Jeng, MW Deem - Physics of life reviews, 2011 - Elsevier
In this review, we discuss modularity and hierarchy in biological systems. We review
examples from protein structure, genetics, and biological networks of modular partitioning of …

Balancing robustness and evolvability

RE Lenski, JE Barrick, C Ofria - PLoS biology, 2006 - journals.plos.org
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