Computational anatomy with the SPM software

J Ashburner - Magnetic resonance imaging, 2009 - Elsevier
An overview of computational procedures for examining neuroanatomical variability is
presented. The review focuses on approaches that can be applied using the SPM software …

Computational anatomy for multi-organ analysis in medical imaging: A review

JJ Cerrolaza, ML Picazo, L Humbert, Y Sato… - Medical image …, 2019 - Elsevier
The medical image analysis field has traditionally been focused on the development of
organ-, and disease-specific methods. Recently, the interest in the development of more …

Geometrically accurate topology-correction of cortical surfaces using nonseparating loops

F Ségonne, J Pacheco, B Fischl - IEEE transactions on medical …, 2007 - ieeexplore.ieee.org
In this paper, we focus on the retrospective topology correction of surfaces. We propose a
technique to accurately correct the spherical topology of cortical surfaces. Specifically, we …

Elastic model-based segmentation of 3-D neuroradiological data sets

A Kelemen, G Székely, G Gerig - IEEE Transactions on medical …, 1999 - ieeexplore.ieee.org
This paper presents a new technique for the automatic model-based segmentation of three-
dimensional (3-D) objects from volumetric image data. The development closely follows the …

A non-local fuzzy segmentation method: application to brain MRI

B Caldairou, N Passat, PA Habas, C Studholme… - Pattern Recognition, 2011 - Elsevier
The Fuzzy C-Means (FCM) algorithm is a widely used and flexible approach to automated
image segmentation, especially in the field of brain tissue segmentation from 3D MRI, where …

Anatomically constrained region deformation for the automated segmentation of the hippocampus and the amygdala: Method and validation on controls and patients …

M Chupin, AR Mukuna-Bantumbakulu, D Hasboun… - Neuroimage, 2007 - Elsevier
We describe a new algorithm for the automated segmentation of the hippocampus (Hc) and
the amygdala (Am) in clinical Magnetic Resonance Imaging (MRI) scans. Based on …

[HTML][HTML] Automatic segmentation of the striatum and globus pallidus using MIST: Multimodal Image Segmentation Tool

E Visser, MC Keuken, G Douaud, V Gaura… - NeuroImage, 2016 - Elsevier
Accurate segmentation of the subcortical structures is frequently required in neuroimaging
studies. Most existing methods use only a T 1-weighted MRI volume to segment all …

Expert knowledge-guided segmentation system for brain MRI

A Pitiot, H Delingette, PM Thompson, N Ayache - NeuroImage, 2004 - Elsevier
We describe an automated 3-D segmentation system for in vivo brain magnetic resonance
images (MRI). Our segmentation method combines a variety of filtering, segmentation, and …

A generic framework for the parcellation of the cortical surface into gyri using geodesic Voronoı diagrams

A Cachia, JF Mangin, D Rivière… - Medical image …, 2003 - Elsevier
In this paper we propose a generic automatic approach for the parcellation of the cortical
surface into labeled gyri. These gyri are defined from a set of pairs of sulci selected by the …

Towards inference of human brain connectivity from MR diffusion tensor data

C Poupon, JF Mangin, CA Clark, V Frouin, J Régis… - Medical Image …, 2001 - Elsevier
This paper describes a method to infer the connectivity induced by white matter fibers in the
living human brain. This method stems from magnetic resonance tensor imaging (DTI), a …