The PUF protein family: overview on PUF RNA targets, biological functions, and post transcriptional regulation

M Wang, L Ogé, MD Perez-Garcia, L Hamama… - International journal of …, 2018 - mdpi.com
Post-transcriptional regulation of gene expression plays a crucial role in many processes. In
cells, it is mediated by diverse RNA-binding proteins. These proteins can influence mRNA …

Mapping protein–RNA binding in plants with individual-nucleotide-resolution UV cross-linking and immunoprecipitation (plant iCLIP2)

M Lewinski, M Brüggemann, T Köster, M Reichel… - Nature …, 2024 - nature.com
Despite crucial roles of RNA-binding proteins (RBPs) in plant physiology and development,
methods for determining their transcriptome-wide binding landscape are less developed …

In vivo single-molecule analysis reveals COOLAIR RNA structural diversity

M Yang, P Zhu, J Cheema, R Bloomer, P Mikulski… - Nature, 2022 - nature.com
Cellular RNAs are heterogeneous with respect to their alternative processing and secondary
structures, but the functional importance of this complexity is still poorly understood. A set of …

A pan-plant protein complex map reveals deep conservation and novel assemblies

CD McWhite, O Papoulas, K Drew, RM Cox, V June… - Cell, 2020 - cell.com
Plants are foundational for global ecological and economic systems, but most plant proteins
remain uncharacterized. Protein interaction networks often suggest protein functions and …

Phase separation of HRLP regulates flowering time in Arabidopsis

Y Zhang, S Fan, C Hua, ZWN Teo, JX Kiang, L Shen… - Science …, 2022 - science.org
RNA binding proteins mediate posttranscriptional RNA metabolism and play regulatory roles
in many developmental processes in eukaryotes. Despite their known effects on the floral …

FLK is an mRNA m6A reader that regulates floral transition by modulating the stability and splicing of FLC in Arabidopsis

U Amara, J Hu, J Cai, H Kang - Molecular Plant, 2023 - cell.com
Abstract N 6-methyladenosine (m 6 A), which is added, removed, and interpreted by m 6 A
writers, erasers, and readers, respectively, is the most abundant modification in eukaryotic …

An oomycete plant pathogen reprograms host pre-mRNA splicing to subvert immunity

J Huang, L Gu, Y Zhang, T Yan, G Kong, L Kong… - Nature …, 2017 - nature.com
The process of RNA splicing influences many physiological processes, including plant
immunity. However, how plant parasites manipulate host RNA splicing process remains …

SERK family receptor-like kinases function as co-receptors with PXY for plant vascular development

H Zhang, X Lin, Z Han, J Wang, LJ Qu, J Chai - Molecular plant, 2016 - cell.com
Abstract In Arabidopsis, the CLAVATA3/EMBRYO SURROUNDING REGION-RELATED
(CLE) peptides play important roles in regulating proliferation and differentiation of plant …

The features and regulation of co-transcriptional splicing in Arabidopsis

D Zhu, F Mao, Y Tian, X Lin, L Gu, H Gu, L Qu, Y Wu… - Molecular plant, 2020 - cell.com
Precursor mRNA (pre-mRNA) splicing is essential for gene expression in most eukaryotic
organisms. Previous studies from mammals, Drosophila, and yeast show that the majority of …

Toward a systems view on RNA-binding proteins and associated RNAs in plants: guilt by association

JL Mateos, D Staiger - The Plant Cell, 2023 - academic.oup.com
RNA-binding proteins (RBPs) have a broad impact on most biochemical, physiological, and
developmental processes in a plant's life. RBPs engage in an on-off relationship with their …