The m6A epitranscriptome: transcriptome plasticity in brain development and function

I Livneh, S Moshitch-Moshkovitz, N Amariglio… - Nature Reviews …, 2020 - nature.com
The field of epitranscriptomics examines the recently deciphered form of gene expression
regulation that is mediated by type-and site-specific RNA modifications. Similarly to the role …

Physiological functions and pathobiology of TDP‐43 and FUS/TLS proteins

A Ratti, E Buratti - Journal of neurochemistry, 2016 - Wiley Online Library
The multiple roles played by RNA binding proteins in neurodegeneration have become
apparent following the discovery of TAR DNA binding protein 43 kDa (TDP‐43) and fused in …

[HTML][HTML] A large-scale binding and functional map of human RNA-binding proteins

EL Van Nostrand, P Freese, GA Pratt, X Wang, X Wei… - Nature, 2020 - nature.com
Many proteins regulate the expression of genes by binding to specific regions encoded in
the genome 1. Here we introduce a new data set of RNA elements in the human genome …

Robust transcriptome-wide discovery of RNA-binding protein binding sites with enhanced CLIP (eCLIP)

EL Van Nostrand, GA Pratt, AA Shishkin… - Nature …, 2016 - nature.com
As RNA-binding proteins (RBPs) play essential roles in cellular physiology by interacting
with target RNA molecules, binding site identification by UV crosslinking and …

Disruption of RNA metabolism in neurological diseases and emerging therapeutic interventions

JK Nussbacher, R Tabet, GW Yeo, C Lagier-Tourenne - Neuron, 2019 - cell.com
RNA binding proteins are critical to the maintenance of the transcriptome via controlled
regulation of RNA processing and transport. Alterations of these proteins impact multiple …

ALS/FTD-linked mutation in FUS suppresses intra-axonal protein synthesis and drives disease without nuclear loss-of-function of FUS

J López-Erauskin, T Tadokoro, MW Baughn, B Myers… - Neuron, 2018 - cell.com
Through the generation of humanized FUS mice expressing full-length human FUS, we
identify that when expressed at near endogenous murine FUS levels, both wild-type and …

Genetically encoded chemical crosslinking of RNA in vivo

W Sun, N Wang, H Liu, B Yu, L Jin, X Ren, Y Shen… - Nature …, 2023 - nature.com
Protein–RNA interactions regulate RNA fate and function, and defects can lead to various
disorders. Such interactions have mainly been studied by nucleoside-based UV crosslinking …

Genetic mutations in RNA-binding proteins and their roles in ALS

K Kapeli, FJ Martinez, GW Yeo - Human genetics, 2017 - Springer
Mutations in genes that encode RNA-binding proteins (RBPs) have emerged as critical
determinants of neurological diseases, especially motor neuron disorders such as …

The neurogenetics of alternative splicing

CK Vuong, DL Black, S Zheng - Nature Reviews Neuroscience, 2016 - nature.com
Alternative precursor-mRNA splicing is a key mechanism for regulating gene expression in
mammals and is controlled by specialized RNA-binding proteins. The misregulation of …

Emerging roles of disordered sequences in RNA-binding proteins

S Calabretta, S Richard - Trends in biochemical sciences, 2015 - cell.com
RNA-binding proteins (RBPs) maintain RNA metabolism homeostasis in the cell by
regulating temporal, spatial, and functional dynamics of RNAs. RBPs achieve RNA binding …