The chemical repertoire of natural ribozymes

JA Doudna, TR Cech - Nature, 2002 - nature.com
Although RNA is generally thought to be a passive genetic blueprint, some RNA molecules,
called ribozymes, have intrinsic enzyme-like activity—they can catalyse chemical reactions …

Mobile group II introns

AM Lambowitz, S Zimmerly - Annu. Rev. Genet., 2004 - annualreviews.org
▪ Abstract Mobile group II introns, found in bacterial and organellar genomes, are both
catalytic RNAs and retrotransposable elements. They use an extraordinary mobility …

Conserved pseudoknots in lncRNA MEG3 are essential for stimulation of the p53 pathway

T Uroda, E Anastasakou, A Rossi, JM Teulon… - Molecular cell, 2019 - cell.com
Long non-coding RNAs (lncRNAs) are key regulatory molecules, but unlike with other RNAs,
the direct link between their tertiary structure motifs and their function has proven elusive …

Metal ions in the structure and function of RNA

A Pyle - JBIC Journal of Biological Inorganic Chemistry, 2002 - Springer
It is becoming increasingly clear that RNA is more than a passive carrier of genetic
information. Folded RNA molecules play key roles in almost every aspect of cellular …

The ins and outs of group II introns

L Bonen, J Vogel - TRENDS in Genetics, 2001 - cell.com
Group II introns have attracted considerable attention as ribozymes, mobile genetic
elements and possible progenitors of nuclear spliceosomal introns. Major advances in …

The molecular structure of long non-coding RNAs: emerging patterns and functional implications

I Chillón, M Marcia - Critical Reviews in Biochemistry and Molecular …, 2020 - Taylor & Francis
Long non-coding RNAs (lncRNAs) are recently-discovered transcripts that regulate vital
cellular processes and are crucially connected to diseases. Despite their unprecedented …

A new algorithm for RNA secondary structure design

M Andronescu, AP Fejes, F Hutter, HH Hoos… - Journal of molecular …, 2004 - Elsevier
The function of many RNAs depends crucially on their structure. Therefore, the design of
RNA molecules with specific structural properties has many potential applications, eg in the …

Group II intron self-splicing

AM Pyle - Annual Review of Biophysics, 2016 - annualreviews.org
Group II introns are large, autocatalytic ribozymes that catalyze RNA splicing and
retrotransposition. Splicing by group II introns plays a major role in the metabolism of plants …

Mapping nucleic acid structure by hydroxyl radical cleavage

TD Tullius, JA Greenbaum - Current opinion in chemical biology, 2005 - Elsevier
Hydroxyl radical footprinting is a widely used method for following the folding of RNA
molecules in solution. This method has the unique ability to provide experimental …

Group II introns: structure and catalytic versatility of large natural ribozymes

K Lehmann, U Schmidt - Critical reviews in biochemistry and …, 2003 - Taylor & Francis
Group II introns are large, natural catalytic RNAs or ribozymes that were discovered in
organelles of certain protists, fungi, algae, and plants and more recently also in prokaryotic …