Applications of single-cell sequencing in cancer research: progress and perspectives
Y Lei, R Tang, J Xu, W Wang, B Zhang, J Liu… - Journal of hematology & …, 2021 - Springer
Single-cell sequencing, including genomics, transcriptomics, epigenomics, proteomics and
metabolomics sequencing, is a powerful tool to decipher the cellular and molecular …
metabolomics sequencing, is a powerful tool to decipher the cellular and molecular …
Insights gained from single-cell analysis of immune cells in the tumor microenvironment
Understanding tumor immune microenvironments is critical for identifying immune modifiers
of cancer progression and developing cancer immunotherapies. Recent applications of …
of cancer progression and developing cancer immunotherapies. Recent applications of …
The landscape of tumor cell states and ecosystems in diffuse large B cell lymphoma
Biological heterogeneity in diffuse large B cell lymphoma (DLBCL) is partly driven by cell-of-
origin subtypes and associated genomic lesions, but also by diverse cell types and cell …
origin subtypes and associated genomic lesions, but also by diverse cell types and cell …
Unraveling B cell trajectories at single cell resolution
D Morgan, V Tergaonkar - Trends in immunology, 2022 - cell.com
During adaptive immunity, B cells differentiate either into memory B cells or plasma cells and
produce antibodies against foreign antigens to fight infection. Additionally, they behave as …
produce antibodies against foreign antigens to fight infection. Additionally, they behave as …
Precise reconstruction of the TME using bulk RNA-seq and a machine learning algorithm trained on artificial transcriptomes
A Zaitsev, M Chelushkin, D Dyikanov, I Cheremushkin… - Cancer Cell, 2022 - cell.com
Cellular deconvolution algorithms virtually reconstruct tissue composition by analyzing the
gene expression of complex tissues. We present the decision tree machine learning …
gene expression of complex tissues. We present the decision tree machine learning …
Untangling the web of intratumour heterogeneity
Z Li, M Seehawer, K Polyak - Nature cell biology, 2022 - nature.com
Intratumour heterogeneity (ITH) is a hallmark of cancer that drives tumour evolution and
disease progression. Technological and computational advances have enabled us to …
disease progression. Technological and computational advances have enabled us to …
Advances in single-cell RNA sequencing and its applications in cancer research
D Huang, N Ma, X Li, Y Gou, Y Duan, B Liu… - Journal of hematology & …, 2023 - Springer
Cancers are a group of heterogeneous diseases characterized by the acquisition of
functional capabilities during the transition from a normal to a neoplastic state. Powerful …
functional capabilities during the transition from a normal to a neoplastic state. Powerful …
A single-cell atlas of non-haematopoietic cells in human lymph nodes and lymphoma reveals a landscape of stromal remodelling
Y Abe, M Sakata-Yanagimoto, M Fujisawa… - Nature cell …, 2022 - nature.com
The activities of non-haematopoietic cells (NHCs), including mesenchymal stromal cells and
endothelial cells, in lymphomas are reported to underlie lymphomagenesis. However, our …
endothelial cells, in lymphomas are reported to underlie lymphomagenesis. However, our …
[HTML][HTML] A single-cell atlas of diffuse large B cell lymphoma
X Ye, L Wang, M Nie, Y Wang, S Dong, W Ren, G Li… - Cell Reports, 2022 - cell.com
Diffuse large B cell lymphoma (DLBCL) is one of the most common yet aggressive types of B
cell lymphoma and remains incurable in 40% of patients. Herein, we profile the …
cell lymphoma and remains incurable in 40% of patients. Herein, we profile the …