[HTML][HTML] Transient naive reprogramming corrects hiPS cells functionally and epigenetically

S Buckberry, X Liu, D Poppe, JP Tan, G Sun, J Chen… - Nature, 2023 - nature.com
Cells undergo a major epigenome reconfiguration when reprogrammed to human induced
pluripotent stem cells (hiPS cells). However, the epigenomes of hiPS cells and human …

[HTML][HTML] Multi-omic approaches to identify genetic factors in metabolic syndrome

KC Clark, AE Kwitek - Comprehensive Physiology, 2021 - ncbi.nlm.nih.gov
Abstract Metabolic Syndrome (MetS) is a highly heritable disease and a major public health
burden worldwide. MetS diagnosis criteria is met by the simultaneous presence of any three …

On the causes, consequences, and avoidance of PCR duplicates: towards a theory of library complexity

NC Rochette, AG Rivera‐Colón, J Walsh… - Molecular ecology …, 2023 - Wiley Online Library
Library preparation protocols for most sequencing technologies involve PCR amplification of
the template DNA, which open the possibility that a given template DNA molecule is …

Computational prediction of the pathogenic status of cancer-specific somatic variants

N Feizi, Q Liu, L Murphy, P Hu - Frontiers in Genetics, 2022 - frontiersin.org
In-silico classification of the pathogenic status of somatic variants is shown to be promising
in promoting the clinical utilization of genetic tests. Majority of the available classification …

[HTML][HTML] Water Stress Responsive Differential Methylation of Organellar Genomes of Zea mays Z59

BD Bhanu, K Ulaganathan, AK Shanker - American Journal of Plant …, 2020 - scirp.org
DNA methylation is an important epigenetic change affecting gene expression in plants in
both normal and stress conditions. The organelles, mitochondria and chloroplast play a …

Multi-omics analysis of stress-related diseases

JM Martins - 2022 - mediatum.ub.tum.de
Exposure to childhood maltreatment (CM) has consistently been linked to an increased risk
for developing psychiatric disorders later on in life. Epigenetic mechanisms such as DNA …

Transcriptomic and epigenetic changes after the phenotypic rescue of a Rett Syndrome mouse model

DV Landin - 2021 - research-repository.uwa.edu.au
Rett Syndrome (RTT) is a severe dominant X-linked neurological disorder affecting 1:
10,000 females. In-95% of the cases, RTT is caused by deleterious mutations in the Methyl …