[HTML][HTML] Oxygen in stem cell biology: a critical component of the stem cell niche

A Mohyeldin, T Garzón-Muvdi, A Quiñones-Hinojosa - Cell stem cell, 2010 - cell.com
The defining hallmark of stem cells is their ability to self-renew and maintain multipotency.
This capacity depends on the balance of complex signals in their microenvironment. Low …

Epigenetic regulation of gene expression: how the genome integrates intrinsic and environmental signals

R Jaenisch, A Bird - Nature genetics, 2003 - nature.com
Cells of a multicellular organism are genetically homogeneous but structurally and
functionally heterogeneous owing to the differential expression of genes. Many of these …

Transcription factors orchestrate dynamic interplay between genome topology and gene regulation during cell reprogramming

R Stadhouders, E Vidal, F Serra, B Di Stefano… - Nature …, 2018 - nature.com
Chromosomal architecture is known to influence gene expression, yet its role in controlling
cell fate remains poorly understood. Reprogramming of somatic cells into pluripotent stem …

Transcription factors drive Tet2-mediated enhancer demethylation to reprogram cell fate

JL Sardina, S Collombet, TV Tian, A Gómez… - Cell stem cell, 2018 - cell.com
Here, we report DNA methylation and hydroxymethylation dynamics at nucleotide resolution
using C/EBPα-enhanced reprogramming of B cells into induced pluripotent cells (iPSCs) …

Single-cell expression analyses during cellular reprogramming reveal an early stochastic and a late hierarchic phase

Y Buganim, DA Faddah, AW Cheng, E Itskovich… - Cell, 2012 - cell.com
During cellular reprogramming, only a small fraction of cells become induced pluripotent
stem cells (iPSCs). Previous analyses of gene expression during reprogramming were …

Cell type of origin influences the molecular and functional properties of mouse induced pluripotent stem cells

JM Polo, S Liu, ME Figueroa, W Kulalert, S Eminli… - Nature …, 2010 - nature.com
Induced pluripotent stem cells (iPSCs) have been derived from various somatic cell
populations through ectopic expression of defined factors. It remains unclear whether iPSCs …

5-Hydroxymethylcytosine in the mammalian zygote is linked with epigenetic reprogramming

M Wossidlo, T Nakamura, K Lepikhov… - Nature …, 2011 - nature.com
The epigenomes of early mammalian embryos are extensively reprogrammed to acquire a
totipotent developmental potential. A major initial event in this reprogramming is the active …

Stability and flexibility of epigenetic gene regulation in mammalian development

W Reik - Nature, 2007 - nature.com
During development, cells start in a pluripotent state, from which they can differentiate into
many cell types, and progressively develop a narrower potential. Their gene-expression …

[HTML][HTML] Pluripotency and cellular reprogramming: facts, hypotheses, unresolved issues

JH Hanna, K Saha, R Jaenisch - Cell, 2010 - cell.com
Direct reprogramming of somatic cells to induced pluripotent stem cells by ectopic
expression of defined transcription factors has raised fundamental questions regarding the …

Chromatin modification and epigenetic reprogramming in mammalian development

E Li - Nature Reviews Genetics, 2002 - nature.com
The developmental programme of embryogenesis is controlled by both genetic and
epigenetic mechanisms. An emerging theme from recent studies is that the regulation of …