DNA replication origin activation in space and time

M Fragkos, O Ganier, P Coulombe… - Nature reviews Molecular …, 2015 - nature.com
DNA replication begins with the assembly of pre-replication complexes (pre-RCs) at
thousands of DNA replication origins during the G1 phase of the cell cycle. At the G1–S …

[HTML][HTML] Chromatin accessibility: a window into the genome

M Tsompana, MJ Buck - Epigenetics & chromatin, 2014 - Springer
Transcriptional activation throughout the eukaryotic lineage has been tightly linked with
disruption of nucleosome organization at promoters, enhancers, silencers, insulators and …

Mechanisms and regulation of DNA replication initiation in eukaryotes

MW Parker, MR Botchan, JM Berger - Critical reviews in …, 2017 - Taylor & Francis
Cellular DNA replication is initiated through the action of multiprotein complexes that
recognize replication start sites in the chromosome (termed origins) and facilitate duplex …

[HTML][HTML] Roles for DNA polymerase δ in initiating and terminating leading strand DNA replication

ZX Zhou, SA Lujan, AB Burkholder, MA Garbacz… - Nature …, 2019 - nature.com
Most current evidence indicates that DNA polymerases ε and δ, respectively, perform the
bulk of leading and lagging strand replication of the eukaryotic nuclear genome. Given that …

The chromatin environment shapes DNA replication origin organization and defines origin classes

C Cayrou, B Ballester, I Peiffer, R Fenouil… - Genome …, 2015 - genome.cshlp.org
To unveil the still-elusive nature of metazoan replication origins, we identified them genome-
wide and at unprecedented high-resolution in mouse ES cells. This allowed initiation sites …

Chromatin and DNA replication

DM MacAlpine, G Almouzni - Cold Spring Harbor …, 2013 - cshperspectives.cshlp.org
The size of a eukaryotic genome presents a unique challenge to the cell: package and
organize the DNA to fit within the confines of the nucleus while at the same time ensuring …

Absolute nucleosome occupancy map for the Saccharomyces cerevisiae genome

E Oberbeckmann, M Wolff, N Krietenstein… - Genome …, 2019 - genome.cshlp.org
Mapping of nucleosomes, the basic DNA packaging unit in eukaryotes, is fundamental for
understanding genome regulation because nucleosomes modulate DNA access by their …

Divergence of a conserved elongation factor and transcription regulation in budding and fission yeast

GT Booth, IX Wang, VG Cheung, JT Lis - Genome research, 2016 - genome.cshlp.org
Complex regulation of gene expression in mammals has evolved from simpler eukaryotic
systems, yet the mechanistic features of this evolution remain elusive. Here, we compared …

Chemical map of Schizosaccharomyces pombe reveals species-specific features in nucleosome positioning

G Moyle-Heyrman, T Zaichuk, L Xi… - Proceedings of the …, 2013 - National Acad Sciences
Using a recently developed chemical approach, we have generated a genome-wide map of
nucleosomes in vivo in Schizosaccharomyces pombe (S. pombe) at base pair resolution …

CHD1 remodelers regulate nucleosome spacing in vitro and align nucleosomal arrays over gene coding regions in S. pombe

J Pointner, J Persson, P Prasad… - The EMBO …, 2012 - embopress.org
Nucleosome positioning governs access to eukaryotic genomes. Many genes show a
stereotypic organisation at their 5′ end: a nucleosome free region just upstream of the …