[HTML][HTML] Environmental DNA metabarcoding for benthic monitoring: A review of sediment sampling and DNA extraction methods

J Pawlowski, K Bruce, K Panksep, FI Aguirre… - Science of the Total …, 2022 - Elsevier
Environmental DNA (eDNA) metabarcoding (parallel sequencing of DNA/RNA for
identification of whole communities within a targeted group) is revolutionizing the field of …

Evaluating eDNA for use within marine environmental impact assessments

S Hinz, J Coston-Guarini, M Marnane… - Journal of Marine …, 2022 - mdpi.com
In this review, the use of environmental DNA (eDNA) within Environmental Impact
Assessment (EIA) is evaluated. EIA documents provide information required by regulators to …

[HTML][HTML] Environmental DNA for biomonitoring

J Pawlowski, A Bonin, F Boyer, T Cordier… - Molecular …, 2021 - ncbi.nlm.nih.gov
The second series of papers concerns the use of eDNA to monitor fish diversity. We focus on
fish because they are among the most important groups of bioindicators and also because …

Assessing the performance and efficiency of environmental DNA/RNA capture methodologies under controlled experimental conditions

A Zaiko, U von Ammon, J Stuart… - Methods in Ecology …, 2022 - Wiley Online Library
Growing interest and affordability of environmental DNA and RNA (eDNA and eRNA)
approaches for biodiversity assessments and monitoring of complex ecosystems have led to …

Eukaryotic biodiversity and spatial patterns in the Clarion-Clipperton Zone and other abyssal regions: Insights from sediment DNA and RNA metabarcoding

F Lejzerowicz, AJ Gooday… - Frontiers in Marine …, 2021 - frontiersin.org
The abyssal seafloor is a mosaic of highly diverse habitats that represent the least known
marine ecosystems on Earth. Some regions enriched in natural resources, such as …

Comparing sediment DNA extraction methods for assessing organic enrichment associated with marine aquaculture

JK Pearman, NB Keeley, SA Wood, O Laroche, A Zaiko… - PeerJ, 2020 - peerj.com
Marine sediments contain a high diversity of micro-and macro-organisms which are
important in the functioning of biogeochemical cycles. Traditionally, anthropogenic …

[HTML][HTML] New technologies for monitoring and upscaling marine ecosystem restoration in deep-sea environments

J Aguzzi, L Thomsen, S Flögel, NJ Robinson, G Picardi… - Engineering, 2024 - Elsevier
Abstract The United Nations (UN)'s call for a decade of “ecosystem restoration” was
prompted by the need to address the extensive impact of anthropogenic activities on natural …

Critical considerations for communicating environmental DNA science

ED Stein, CL Jerde, EA Allan, AJ Sepulveda… - Environmental …, 2024 - Wiley Online Library
The economic and methodological efficiencies of environmental DNA (eDNA) based survey
approaches provide an unprecedented opportunity to assess and monitor aquatic …

Comparative analysis of freshwater phytoplankton communities in two lakes of Burabay National Park using morphological and molecular approaches

DV Malashenkov, V Dashkova, K Zhakupova… - Scientific Reports, 2021 - nature.com
We analyzed phytoplankton assemblages' variations in oligo-mesotrophic Shchuchie and
Burabay lakes using traditional morphological and next-generation sequencing (NGS) …

Merging two eDNA metabarcoding approaches and citizen‐science‐based sampling to facilitate fish community monitoring along vast Sub‐Saharan coastlines

A Burian, K Bruce, E Tovela, J Bakker… - Molecular Ecology …, 2023 - Wiley Online Library
Abstract The coastline of Sub‐Saharan Africa hosts highly diverse fish communities of great
conservation value, which are also key resources for local livelihoods. However, many …