Recent large-scale collaborations are generating major surveys of cell types and
connections in the mouse brain, collecting large amounts of data across modalities, spatial …

Recent proliferation and integration of tissue-clearing methods and light-sheet fluorescence
microscopy has created new opportunities to achieve mesoscale three-dimensional whole …

Transgenic animal models are invaluable research tools for elucidating the pathways and
mechanisms involved in the development of neurodegenerative diseases. Mechanistic clues …

Simple Summary Understanding the relationships between sets of regions across the brain
is critical to understanding of cognitive function. The application of graph theoretical …

Registration of data to a common frame of reference is an essential step in the analysis and
integration of diverse neuroscientific data. To this end, volumetric brain atlases enable …

With recent technological advances in microscopy and image acquisition of tissue sections,
further developments of tools are required for viewing, transforming, and analyzing the ever …

Understanding the relationship between fine-scale spatial organization and biological
function necessitates a tool that effectively combines spatial positions, morphological …

The embryonic mouse brain undergoes drastic changes in establishing basic anatomical
compartments and laying out major axonal connections of the developing brain. Correlating …

Translational work in rodents elucidates basic mechanisms that drive complex behaviors
relevant to psychiatric and neurological conditions. Nonetheless, numerous promising …

To accurately explore the anatomical organization of neural circuits in the brain, it is crucial
to map the experimental brain data onto a standardized system of coordinates. Studying 2D …