Omicron genetic and clinical peculiarities that may overturn SARS-CoV-2 pandemic: a literature review

G Tiecco, S Storti, M Degli Antoni, E Focà… - International Journal of …, 2022 - mdpi.com
The Coronavirus disease 2019 (COVID-19) pandemic poses a great threat to global public
health. The original wild-type strain of severe acute respiratory syndrome coronavirus 2 …

Evolution of the SARS-CoV-2 Omicron spike

RJ Parsons, P Acharya - Cell reports, 2023 - cell.com
The severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) Omicron variant of
concern, first identified in November 2021, rapidly spread worldwide and diversified into …

Spike and nsp6 are key determinants of SARS-CoV-2 Omicron BA. 1 attenuation

DY Chen, CV Chin, D Kenney, AH Tavares, N Khan… - Nature, 2023 - nature.com
Abstract The SARS-CoV-2 Omicron variant is more immune evasive and less virulent than
other major viral variants that have so far been recognized,,,,,,,,,,–. The Omicron spike (S) …

[HTML][HTML] Genomic surveillance for SARS-CoV-2 variants: predominance of the Delta (B. 1.617. 2) and Omicron (B. 1.1. 529) variants—United States, June 2021 …

AS Lambrou - MMWR. Morbidity and mortality weekly report, 2022 - cdc.gov
CDC's SARS-CoV-2 genomic surveillance has been expanded to incorporate sequence
data from public repositories and to produce weighted estimates of variant proportions at the …

Wastewater-based detection of two influenza outbreaks

MK Wolfe, D Duong, KM Bakker… - … & Technology Letters, 2022 - ACS Publications
Traditional influenza surveillance informs control strategies but can lag behind outbreak
onset and undercount cases. Wastewater surveillance is effective for monitoring near real …

Genetic diversity and evolutionary convergence of cryptic SARS-CoV-2 lineages detected via wastewater sequencing

DA Gregory, M Trujillo, C Rushford, A Flury… - PLoS …, 2022 - journals.plos.org
Wastewater-based epidemiology (WBE) is an effective way of tracking the appearance and
spread of SARS-COV-2 lineages through communities. Beginning in early 2021, we …

[HTML][HTML] The rapid spread of SARS-COV-2 Omicron variant in Italy reflected early through wastewater surveillance

G La Rosa, M Iaconelli, C Veneri, P Mancini… - Science of the Total …, 2022 - Elsevier
Abstract The SARS-CoV-2 Omicron variant emerged in South Africa in November 2021, and
has later been identified worldwide, raising serious concerns. A real-time RT-PCR assay …

Modeling infection from SARS-CoV-2 wastewater concentrations: promise, limitations, and future directions

J Soller, W Jennings, M Schoen, A Boehm… - Journal of water and …, 2022 - iwaponline.com
Estimating total infection levels, including unreported and asymptomatic infections, is
important for understanding community disease transmission. Wastewater can provide a …

Enabling accurate and early detection of recently emerged SARS-CoV-2 variants of concern in wastewater

N Sapoval, Y Liu, EG Lou, L Hopkins, KB Ensor… - Nature …, 2023 - nature.com
As clinical testing declines, wastewater monitoring can provide crucial surveillance on the
emergence of SARS-CoV-2 variant of concerns (VoCs) in communities. In this paper we …

[HTML][HTML] Identification and genome sequencing of an influenza H3N2 variant in wastewater from elementary schools during a surge of influenza A cases in Las Vegas …

V Vo, A Harrington, CL Chang, H Baker… - Science of The Total …, 2023 - Elsevier
Real-time surveillance of infectious diseases at schools or in communities is often hampered
by delays in reporting due to resource limitations and infrastructure issues. By incorporating …