The Mediator complex as a master regulator of transcription by RNA polymerase II

WF Richter, S Nayak, J Iwasa, DJ Taatjes - Nature Reviews Molecular …, 2022 - nature.com
The Mediator complex, which in humans is 1.4 MDa in size and includes 26 subunits,
controls many aspects of RNA polymerase II (Pol II) function. Apart from its size, a defining …

Transcription regulation by the Mediator complex

J Soutourina - Nature reviews Molecular cell biology, 2018 - nature.com
Alterations in the regulation of gene expression are frequently associated with
developmental diseases or cancer. Transcription activation is a key phenomenon in the …

[HTML][HTML] Control of transcript variability in single mammalian cells

N Battich, T Stoeger, L Pelkmans - Cell, 2015 - cell.com
A central question in biology is whether variability between genetically identical cells
exposed to the same culture conditions is largely stochastic or deterministic. Using image …

Nucleoporin TPR is an integral component of the TREX-2 mRNA export pathway

V Aksenova, A Smith, H Lee, P Bhat, C Esnault… - Nature …, 2020 - nature.com
Nuclear pore complexes (NPCs) are important for cellular functions beyond
nucleocytoplasmic trafficking, including genome organization and gene expression. This …

The role of TREX in gene expression and disease

CG Heath, N Viphakone, SA Wilson - Biochemical Journal, 2016 - portlandpress.com
TRanscription and EXport (TREX) is a conserved multisubunit complex essential for
embryogenesis, organogenesis and cellular differentiation throughout life. By linking …

The mediator complex: at the nexus of RNA polymerase II transcription

C Jeronimo, F Robert - Trends in Cell Biology, 2017 - cell.com
Mediator is an essential, large, multisubunit, transcriptional co-activator highly conserved
across eukaryotes. Mediator interacts with gene-specific transcription factors at enhancers …

Linking key steps of microRNA biogenesis by TREX-2 and the nuclear pore complex in Arabidopsis

B Zhang, C You, Y Zhang, L Zeng, J Hu, M Zhao… - Nature plants, 2020 - nature.com
Unlike in metazoans, the stepwise biogenesis of microRNAs (miRNAs) in plants occurs
within the nucleus. Whether or how the major steps in miRNA biogenesis are coordinated is …

Docking a flexible basket onto the core of the nuclear pore complex

E Stankunas, A Köhler - Nature Cell Biology, 2024 - nature.com
The nuclear basket attaches to the nucleoplasmic side of the nuclear pore complex (NPC),
coupling transcription to mRNA quality control and export. The basket expands the …

A R-loop sensing pathway mediates the relocation of transcribed genes to nuclear pore complexes

A Penzo, M Dubarry, C Brocas, M Zheng… - Nature …, 2023 - nature.com
Nuclear pore complexes (NPCs) have increasingly recognized interactions with the
genome, as exemplified in yeast, where they bind transcribed or damaged chromatin. By …

GBPL3 localizes to the nuclear pore complex and functionally connects the nuclear basket with the nucleoskeleton in plants

Y Tang, MI Ho, BH Kang, Y Gu - PLoS biology, 2022 - journals.plos.org
The nuclear basket (NB) is an essential structure of the nuclear pore complex (NPC) and
serves as a dynamic and multifunctional platform that participates in various critical nuclear …