The effects of non-synonymous single nucleotide polymorphisms (nsSNPs) on protein–protein interactions

CM Yates, MJE Sternberg - Journal of molecular biology, 2013 - Elsevier
Non-synonymous single nucleotide polymorphisms (nsSNPs) are single base changes
leading to a change to the amino acid sequence of the encoded protein. Many of these …

Protein aggregation: mechanisms and functional consequences

G Invernizzi, E Papaleo, R Sabate, S Ventura - The international journal of …, 2012 - Elsevier
Understanding the mechanisms underlying protein misfolding and aggregation has become
a central issue in biology and medicine. Compelling evidence show that the formation of …

A FTIR microspectroscopy study of the structural and biochemical perturbations induced by natively folded and aggregated transthyretin in HL-1 cardiomyocytes

D Ami, P Mereghetti, M Leri, S Giorgetti, A Natalello… - Scientific Reports, 2018 - nature.com
Protein misfolding and aggregation are associated with a number of human degenerative
diseases. In spite of the enormous research efforts to develop effective strategies aimed at …

Localized structural fluctuations promote amyloidogenic conformations in transthyretin

KH Lim, HJ Dyson, JW Kelly, PE Wright - Journal of molecular biology, 2013 - Elsevier
The process of transthyretin (TTR) misfolding and aggregation, including amyloid formation,
appears to cause a number of degenerative diseases. During amyloid formation, the native …

Transthyretin deposition in familial amyloidotic polyneuropathy

MJ Saraiva, J Magalhaes, N Ferreira… - Current medicinal …, 2012 - ingentaconnect.com
The subject of the review is on hereditary transthyretin (TTR) amyloidosis which is a
genetically transmitted disease that results from a mutation in the gene encoding the plasma …

Cluster analysis of molecular simulation trajectories for systems where both conformation and orientation of the sampled states are important

TM Abramyan, JA Snyder… - Journal of …, 2016 - Wiley Online Library
Clustering methods have been widely used to group together similar conformational states
from molecular simulations of biomolecules in solution. For applications such as the …

Pathogenic mutations induce partial structural changes in the native β-sheet structure of transthyretin and accelerate aggregation

KH Lim, AKR Dasari, R Ma, I Hung, Z Gan, JW Kelly… - Biochemistry, 2017 - ACS Publications
Amyloid formation of natively folded proteins involves global and/or local unfolding of the
native state to form aggregation-prone intermediates. Here we report solid-state nuclear …

Clinical and biochemical characterization of hereditary transthyretin amyloidosis caused by E61K mutation

X Chu, M Wang, R Tang, Y Huang, J Yu… - Frontiers in Molecular …, 2022 - frontiersin.org
Objects: This study was intended to find out more about the clinical characterizations of
patients carrying transthyretin (TTR) E61K (p. Glu81Lys) gene mutation and the biochemical …

Edge strand dissociation and conformational changes in transthyretin under amyloidogenic conditions

MC Childers, V Daggett - Biophysical Journal, 2020 - cell.com
During amyloidogenesis, proteins undergo conformational changes that allow them to
aggregate and assemble into insoluble, fibrillar structures. Soluble oligomers that form …

Biophysical characterization and modulation of Transthyretin Ala97Ser

YT Liu, YJ Yen, F Ricardo, Y Chang… - Annals of Clinical …, 2019 - Wiley Online Library
Abstract Objective Ala97Ser (A97S) is the major transthyretin (TTR) mutation in Taiwanese
patients of familial amyloid polyneuropathy (FAP), characterized by a late‐onset but rapidly …