[HTML][HTML] ClpXP, an ATP-powered unfolding and protein-degradation machine
TA Baker, RT Sauer - Biochimica et Biophysica Acta (BBA)-Molecular Cell …, 2012 - Elsevier
ClpXP is a AAA+ protease that uses the energy of ATP binding and hydrolysis to perform
mechanical work during targeted protein degradation within cells. ClpXP consists of …
mechanical work during targeted protein degradation within cells. ClpXP consists of …
[HTML][HTML] An overview of molecular modeling for drug discovery with specific illustrative examples of applications
M Aminpour, C Montemagno, JA Tuszynski - Molecules, 2019 - mdpi.com
In this paper we review the current status of high-performance computing applications in the
general area of drug discovery. We provide an introduction to the methodologies applied at …
general area of drug discovery. We provide an introduction to the methodologies applied at …
[HTML][HTML] Force triggers YAP nuclear entry by regulating transport across nuclear pores
YAP is a mechanosensitive transcriptional activator with a critical role in cancer,
regeneration, and organ size control. Here, we show that force applied to the nucleus …
regeneration, and organ size control. Here, we show that force applied to the nucleus …
Mechanical processes in biochemistry
C Bustamante, YR Chemla, NR Forde… - Annual review of …, 2004 - annualreviews.org
▪ Abstract Mechanical processes are involved in nearly every facet of the cell cycle.
Mechanical forces are generated in the cell during processes as diverse as chromosomal …
Mechanical forces are generated in the cell during processes as diverse as chromosomal …
Tension-tuned receptors for synthetic mechanotransduction and intercellular force detection
Cells interpret mechanical stimuli from their environments and neighbors, but the ability to
engineer customized mechanosensing capabilities has remained a synthetic and …
engineer customized mechanosensing capabilities has remained a synthetic and …
The role of single-protein elasticity in mechanobiology
AEM Beedle, S Garcia-Manyes - Nature Reviews Materials, 2023 - nature.com
In addition to biochemical signals and genetic considerations, mechanical forces are rapidly
emerging as a master regulator of human physiology. However, the molecular mechanisms …
emerging as a master regulator of human physiology. However, the molecular mechanisms …
Genetic variation in titin in arrhythmogenic right ventricular cardiomyopathy–overlap syndromes
M Taylor, S Graw, G Sinagra, C Barnes, D Slavov… - Circulation, 2011 - Am Heart Assoc
Background—Arrhythmogenic right ventricular cardiomyopathy (ARVC) is an inherited
genetic myocardial disease characterized by fibrofatty replacement of the myocardium and a …
genetic myocardial disease characterized by fibrofatty replacement of the myocardium and a …
AFM: a versatile tool in biophysics
A Alessandrini, P Facci - Measurement science and technology, 2005 - iopscience.iop.org
Here we review the applications of atomic force microscopy to the study of samples of
biological origin. Emphasis is given to provide the reader with information on the broad …
biological origin. Emphasis is given to provide the reader with information on the broad …
[HTML][HTML] Discovery through the computational microscope
All-atom molecular dynamics simulations have become increasingly popular as a tool to
investigate protein function and dynamics. However, researchers are concerned about the …
investigate protein function and dynamics. However, researchers are concerned about the …
The mechanical stability of ubiquitin is linkage dependent
Ubiquitin chains are formed through the action of a set of enzymes that covalently link
ubiquitin either through peptide bonds or through isopeptide bonds between their C …
ubiquitin either through peptide bonds or through isopeptide bonds between their C …