The maternal-to-zygotic transition revisited

NL Vastenhouw, WX Cao, HD Lipshitz - Development, 2019 - journals.biologists.com
The development of animal embryos is initially directed by maternal gene products. Then,
during the maternal-to-zygotic transition (MZT), developmental control is handed to the …

Zygotic genome activation in vertebrates

D Jukam, SAM Shariati, JM Skotheim - Developmental cell, 2017 - cell.com
The first major developmental transition in vertebrate embryos is the maternal-to-zygotic
transition (MZT) when maternal mRNAs are degraded and zygotic transcription begins …

A single-cell transcriptome atlas profiles early organogenesis in human embryos

Y Xu, T Zhang, Q Zhou, M Hu, Y Qi, Y Xue, Y Nie… - Nature cell …, 2023 - nature.com
The early window of human embryogenesis is largely a black box for developmental
biologists. Here we probed the cellular diversity of 4–6 week human embryos when …

Genome evolution in the allotetraploid frog Xenopus laevis

AM Session, Y Uno, T Kwon, JA Chapman, A Toyoda… - Nature, 2016 - nature.com
To explore the origins and consequences of tetraploidy in the African clawed frog, we
sequenced the Xenopus laevis genome and compared it to the related diploid X. tropicalis …

Dynamic landscape and regulation of RNA editing in mammals

MH Tan, Q Li, R Shanmugam, R Piskol, J Kohler… - Nature, 2017 - nature.com
Abstract Adenosine-to-inosine (A-to-I) RNA editing is a conserved post-transcriptional
mechanism mediated by ADAR enzymes that diversifies the transcriptome by altering …

[HTML][HTML] lincRNAs: genomics, evolution, and mechanisms

I Ulitsky, DP Bartel - Cell, 2013 - cell.com
Long intervening noncoding RNAs (lincRNAs) are transcribed from thousands of loci in
mammalian genomes and might play widespread roles in gene regulation and other cellular …

PLEK: a tool for predicting long non-coding RNAs and messenger RNAs based on an improved k-mer scheme

A Li, J Zhang, Z Zhou - BMC bioinformatics, 2014 - Springer
Background High-throughput transcriptome sequencing (RNA-seq) technology promises to
discover novel protein-coding and non-coding transcripts, particularly the identification of …

A high-resolution mRNA expression time course of embryonic development in zebrafish

RJ White, JE Collins, IM Sealy, N Wali, CM Dooley… - elife, 2017 - elifesciences.org
We have produced an mRNA expression time course of zebrafish development across 18
time points from 1 cell to 5 days post-fertilisation sampling individual and pools of embryos …

Zygotic genome activation during the maternal-to-zygotic transition

MT Lee, AR Bonneau, AJ Giraldez - Annual review of cell and …, 2014 - annualreviews.org
Embryogenesis depends on a highly coordinated cascade of genetically encoded events. In
animals, maternal factors contributed by the egg cytoplasm initially control development …

A chemical-inducible CRISPR–Cas9 system for rapid control of genome editing

KI Liu, MNB Ramli, CWA Woo, Y Wang, T Zhao… - Nature chemical …, 2016 - nature.com
CRISPR–Cas9 has emerged as a powerful technology that enables ready modification of
the mammalian genome. The ability to modulate Cas9 activity can reduce off-target …