[HTML][HTML] SR proteins: binders, regulators, and connectors of RNA

S Jeong - Molecules and cells, 2017 - Elsevier
Serine and arginine-rich (SR) proteins are RNA-binding proteins (RBPs) known as
constitutive and alternative splicing regulators. As splicing is linked to transcriptional and …

RNA polymerase II elongation control

Q Zhou, T Li, DH Price - Annual review of biochemistry, 2012 - annualreviews.org
Regulation of the elongation phase of transcription by RNA polymerase II (Pol II) is utilized
extensively to generate the pattern of mRNAs needed to specify cell types and to respond to …

Human Splicing Finder: an online bioinformatics tool to predict splicing signals

FO Desmet, D Hamroun, M Lalande… - Nucleic acids …, 2009 - academic.oup.com
Thousands of mutations are identified yearly. Although many directly affect protein
expression, an increasing proportion of mutations is now believed to influence mRNA …

CircURI1 interacts with hnRNPM to inhibit metastasis by modulating alternative splicing in gastric cancer

X Wang, J Li, X Bian, C Wu, J Hua… - Proceedings of the …, 2021 - National Acad Sciences
Circular RNAs (circRNAs) have emerged as key regulators of human cancers, yet their
modes of action in gastric cancer (GC) remain largely unknown. Here, we identified circURI1 …

Protein posttranslational modifications: the chemistry of proteome diversifications

CT Walsh, S Garneau‐Tsodikova… - Angewandte Chemie …, 2005 - Wiley Online Library
The diversity of distinct covalent forms of proteins (the proteome) greatly exceeds the
number of proteins predicted by DNA coding capacities owing to directed posttranslational …

ESEfinder: a web resource to identify exonic splicing enhancers

L Cartegni, J Wang, Z Zhu, MQ Zhang… - Nucleic acids …, 2003 - academic.oup.com
Point mutations frequently cause genetic diseases by disrupting the correct pattern of pre-
mRNA splicing. The effect of a point mutation within a coding sequence is traditionally …

The MicroRNA miR-124 promotes neuronal differentiation by triggering brain-specific alternative pre-mRNA splicing

EV Makeyev, J Zhang, MA Carrasco, T Maniatis - Molecular cell, 2007 - cell.com
Both microRNAs and alternative pre-mRNA splicing have been implicated in the
development of the nervous system (NS), but functional interactions between these two …

RNA processing and its regulation: global insights into biological networks

DD Licatalosi, RB Darnell - Nature Reviews Genetics, 2010 - nature.com
In recent years views of eukaryotic gene expression have been transformed by the finding
that enormous diversity can be generated at the RNA level. Advances in technologies for …

From genomics to proteomics

M Tyers, M Mann - Nature, 2003 - nature.com
Proteomics is the study of the function of all expressed proteins. Tremendous progress has
been made in the past few years in generating large-scale data sets for protein–protein …

Specification of synaptic connectivity by cell surface interactions

J De Wit, A Ghosh - Nature Reviews Neuroscience, 2016 - nature.com
The molecular diversification of cell surface molecules has long been postulated to impart
specific surface identities on neuronal cell types. The existence of unique cell surface …