Fast and accurate estimation of species-specific diversification rates using data augmentation
Diversification rates vary across species as a response to various factors, including
environmental conditions and species-specific features. Phylogenetic models that allow …
environmental conditions and species-specific features. Phylogenetic models that allow …
Infectious disease phylodynamics with occurrence data
LA Featherstone, F Di Giallonardo… - Methods in Ecology …, 2021 - Wiley Online Library
Phylodynamic models use pathogen genome sequence data to infer epidemiological
dynamics. With the increasing genomic surveillance of pathogens, especially during the …
dynamics. With the increasing genomic surveillance of pathogens, especially during the …
Additional analytical support for a new method to compute the likelihood of diversification models
G Laudanno, B Haegeman, RS Etienne - Bulletin of mathematical biology, 2020 - Springer
Molecular phylogenies have been increasingly recognized as an important source of
information on species diversification. For many models of macroevolution, analytical …
information on species diversification. For many models of macroevolution, analytical …
What fruits can we get from this tree?: A journey in phylogenetic inference through likelihood modeling
G Laudanno - 2021 - research.rug.nl
This thesis provides new tools for extracting information on the process of diversification
from a phylogenetic tree. To do so the standard approach is to employ likelihood functions in …
from a phylogenetic tree. To do so the standard approach is to employ likelihood functions in …
[PDF][PDF] What fruits can we get from this tree?
G Laudanno - research.rug.nl
Organisms evolve over time. This process is mainly driven by stochastic events and
selection, and its effects can be observed after many generations. This introduces one of the …
selection, and its effects can be observed after many generations. This introduces one of the …