Synthetic biology to access and expand nature's chemical diversity

MJ Smanski, H Zhou, J Claesen, B Shen… - Nature Reviews …, 2016 - nature.com
Bacterial genomes encode the biosynthetic potential to produce hundreds of thousands of
complex molecules with diverse applications, from medicine to agriculture and materials …

Functional nucleic acid sensors

J Liu, Z Cao, Y Lu - Chemical reviews, 2009 - ACS Publications
Sensors are devices that respond to physical or chemical stimuli and produce detectable
signals. 1r4 They are a critical extension of human perception of the world in many aspects …

Fluorescence imaging of cellular metabolites with RNA

JS Paige, T Nguyen-Duc, W Song, SR Jaffrey - Science, 2012 - science.org
Genetically encoded sensors are powerful tools for imaging intracellular metabolites and
signaling molecules. However, developing sensors is challenging because they require …

Functional aptamers and aptazymes in biotechnology, diagnostics, and therapy

M Famulok, JS Hartig, G Mayer - Chemical reviews, 2007 - ACS Publications
Aptamers are single-stranded nucleic acid molecules that possess properties comparable to
those of protein monoclonal antibodies, and thus are clear alternatives to long established …

Environmentally controlled invasion of cancer cells by engineered bacteria

JC Anderson, EJ Clarke, AP Arkin, CA Voigt - Journal of molecular biology, 2006 - Elsevier
Bacteria can sense their environment, distinguish between cell types, and deliver proteins to
eukaryotic cells. Here, we engineer the interaction between bacteria and cancer cells to …

RNA synthetic biology

FJ Isaacs, DJ Dwyer, JJ Collins - Nature biotechnology, 2006 - nature.com
RNA molecules play important and diverse regulatory roles in the cell by virtue of their
interaction with other nucleic acids, proteins and small molecules. Inspired by this natural …

Programmable ligand-controlled riboregulators of eukaryotic gene expression

TS Bayer, CD Smolke - Nature biotechnology, 2005 - nature.com
Recent studies have demonstrated the importance of noncoding RNA elements in regulating
gene expression networks,. We describe the design of a class of small trans-acting RNAs …

[HTML][HTML] Engineering biological systems with synthetic RNA molecules

JC Liang, RJ Bloom, CD Smolke - Molecular cell, 2011 - cell.com
RNA molecules play diverse functional roles in natural biological systems. There has been
growing interest in designing synthetic RNA counterparts for programming biological …

Tracking, tuning, and terminating microbial physiology using synthetic riboregulators

JM Callura, DJ Dwyer, FJ Isaacs… - Proceedings of the …, 2010 - National Acad Sciences
The development of biomolecular devices that interface with biological systems to reveal
new insights and produce novel functions is one of the defining goals of synthetic biology …

Screening for engineered neomycin riboswitches that control translation initiation

JE Weigand, M Sanchez, EB Gunnesch, S Zeiher… - Rna, 2008 - rnajournal.cshlp.org
Riboswitches are genetic control elements that regulate gene expression in a small
molecule-dependent way. We developed a two-stage strategy of in vitro selection followed …