The plant microbiome: from ecology to reductionism and beyond

CR Fitzpatrick, I Salas-González… - Annual review of …, 2020 - annualreviews.org
Methodological advances over the past two decades have propelled plant microbiome
research, allowing the field to comprehensively test ideas proposed over a century ago and …

Methods used for the study of endophytic fungi: A review on methodologies and challenges, and associated tips

JBA Dos Reis, AS Lorenzi, HMM do Vale - Archives of Microbiology, 2022 - Springer
Endophytic fungi are microorganisms that colonize the interior of plant tissues (eg leaves,
seeds, stem, trunk, roots, fruits, flowers) in intracellular and/or extracellular spaces without …

How do fungi survive in the sea and respond to climate change?

EBG Jones, S Ramakrishna, S Vikineswary, D Das… - Journal of Fungi, 2022 - mdpi.com
With the over 2000 marine fungi and fungal-like organisms documented so far, some have
adapted fully to life in the sea, while some have the ability to tolerate environmental …

Fungi, bacteria and oomycota opportunistically isolated from the seagrass, Zostera marina

CL Ettinger, JA Eisen - PloS one, 2020 - journals.plos.org
Fungi in the marine environment are often neglected as a research topic, despite that fungi
having critical roles on land as decomposers, pathogens or endophytes. Here we used …

Sediment microbiomes associated with the rhizosphere of emergent macrophytes in a shallow, subtropical lake

R Huang, J Zeng, D Zhao, KV Cook… - Limnology and …, 2020 - Wiley Online Library
Rhizosphere microbiota has received much attention due to their associations with plant
growth and their fundamental importance in terrestrial ecosystems. However, relatively few …

Cable bacteria at oxygen‐releasing roots of aquatic plants: a widespread and diverse plant–microbe association

VV Scholz, BC Martin, R Meyer, A Schramm… - New …, 2021 - Wiley Online Library
Cable bacteria are sulfide‐oxidising, filamentous bacteria that reduce toxic sulfide levels,
suppress methane emissions and drive nutrient and carbon cycling in sediments. Recently …

Distinct endophytic bacterial communities inhabiting seagrass seeds

F Tarquinio, O Attlan, MA Vanderklift, O Berry… - Frontiers in …, 2021 - frontiersin.org
Seagrasses are marine angiosperms that can live completely or partially submerged in
water and perform a variety of significant ecosystem services. Like terrestrial angiosperms …

A Tight Interaction between the Native Seagrass Cymodocea nodosa and the Exotic Halophila stipulacea in the Aegean Sea Highlights Seagrass Holobiont …

C Conte, ET Apostolaki, S Vizzini, L Migliore - Plants, 2023 - mdpi.com
Seagrasses harbour bacterial communities with which they constitute a functional unit called
holobiont that responds as a whole to environmental changes. Epiphytic bacterial …

The seagrass holobiont: what we know and what we still need to disclose for its possible use as an ecological indicator

C Conte, A Rotini, L Manfra, MM D'Andrea, G Winters… - Water, 2021 - mdpi.com
Microbes and seagrass establish symbiotic relationships constituting a functional unit called
the holobiont that reacts as a whole to environmental changes. Recent studies have shown …

Characterization of the Mycobiome of the Seagrass, Zostera marina, Reveals Putative Associations With Marine Chytrids

CL Ettinger, JA Eisen - Frontiers in microbiology, 2019 - frontiersin.org
Seagrasses are globally distributed marine flowering plants that are foundation species in
coastal ecosystems. Seagrass beds play essential roles as habitats and hatcheries, in …