The roles of sexual selection and sexual conflict in shaping patterns of genome and transcriptome variation

NM Tosto, ER Beasley, BBM Wong, JE Mank… - Nature Ecology & …, 2023 - nature.com
Sexual dimorphism is one of the most prevalent, and often the most extreme, examples of
phenotypic variation within species, and arises primarily from genomic variation that is …

Sex-biased gene expression and sexual conflict throughout development

FC Ingleby, I Flis, EH Morrow - Cold Spring Harbor …, 2015 - cshperspectives.cshlp.org
Sex-biased gene expression is likely to account for most sexually dimorphic traits because
males and females share much of their genome. When fitness optima differ between sexes …

Genome-wide regulation of 5hmC, 5mC, and gene expression by Tet1 hydroxylase in mouse embryonic stem cells

Y Xu, F Wu, L Tan, L Kong, L Xiong, J Deng… - Molecular cell, 2011 - cell.com
DNA methylation at the 5 position of cytosine (5mC) in the mammalian genome is a key
epigenetic event critical for various cellular processes. The ten-eleven translocation (Tet) …

Lignin metabolism has a central role in the resistance of cotton to the wilt fungus Verticillium dahliae as revealed by RNA-Seq-dependent transcriptional analysis and …

L Xu, L Zhu, L Tu, L Liu, D Yuan, L Jin… - Journal of …, 2011 - academic.oup.com
The incompatible pathosystem between resistant cotton (Gossypium barbadense cv. 7124)
and Verticillium dahliae strain V991 was used to study the cotton transcriptome changes …

[HTML][HTML] Dicer partner proteins tune the length of mature miRNAs in flies and mammals

R Fukunaga, BW Han, JH Hung, J Xu, Z Weng… - Cell, 2012 - cell.com
Summary Drosophila Dicer-1 produces microRNAs (miRNAs) from pre-miRNA, whereas
Dicer-2 generates small interfering RNAs (siRNAs) from long dsRNA. Alternative splicing of …

Evidence for compensatory upregulation of expressed X-linked genes in mammals, Caenorhabditis elegans and Drosophila melanogaster

X Deng, JB Hiatt, DK Nguyen, S Ercan, D Sturgill… - Nature …, 2011 - nature.com
Many animal species use a chromosome-based mechanism of sex determination, which has
led to the coordinate evolution of dosage-compensation systems. Dosage compensation not …

Zebrafish mRNA sequencing deciphers novelties in transcriptome dynamics during maternal to zygotic transition

H Aanes, CL Winata, CH Lin, JP Chen… - Genome …, 2011 - genome.cshlp.org
Maternally deposited mRNAs direct early development before the initiation of zygotic
transcription during mid-blastula transition (MBT). To study mechanisms regulating this …

Emergent dynamics of adult stem cell lineages from single nucleus and single cell RNA-Seq of Drosophila testes

AA Raz, GS Vida, SR Stern, S Mahadevaraju… - Elife, 2023 - elifesciences.org
Proper differentiation of sperm from germline stem cells, essential for production of the next
generation, requires dramatic changes in gene expression that drive remodeling of almost …

The Ontogeny and Evolution of Sex-Biased Gene Expression in Drosophila melanogaster

JC Perry, PW Harrison, JE Mank - Molecular biology and …, 2014 - academic.oup.com
Sexually dimorphic phenotypes are thought to largely result from sex differences in gene
expression, and genes with sex-biased expression have been well characterized in adults of …

Sex Chromosome-Specific Regulation in the Drosophila Male Germline But Little Evidence for Chromosomal Dosage Compensation or Meiotic Inactivation

CD Meiklejohn, EL Landeen, JM Cook, SB Kingan… - PLoS …, 2011 - journals.plos.org
The evolution of heteromorphic sex chromosomes (eg, XY in males or ZW in females) has
repeatedly elicited the evolution of two kinds of chromosome-specific regulation: dosage …