Stacks 2: Analytical methods for paired‐end sequencing improve RADseq‐based population genomics
NC Rochette, AG Rivera‐Colón… - Molecular ecology, 2019 - Wiley Online Library
For half a century population genetics studies have put type II restriction endonucleases to
work. Now, coupled with massively‐parallel, short‐read sequencing, the family of RAD …
work. Now, coupled with massively‐parallel, short‐read sequencing, the family of RAD …
Common misconceptions in molecular ecology: echoes of the modern synthesis
The field of molecular ecology has burgeoned into a large discipline spurred on by technical
innovations that facilitate the rapid acquisition of large amounts of genotypic data, by the …
innovations that facilitate the rapid acquisition of large amounts of genotypic data, by the …
Sympatric speciation in the post “modern synthesis” era of evolutionary biology
Sympatric speciation is among the most controversial and challenging concepts in evolution.
There are a multitude of definitions of speciation alone, and when combined with the …
There are a multitude of definitions of speciation alone, and when combined with the …
A decade of seascape genetics: contributions to basic and applied marine connectivity
Seascape genetics, a term coined in 2006, is a fast growing area of population genetics that
draws on ecology, oceanography and geography to address challenges in basic …
draws on ecology, oceanography and geography to address challenges in basic …
Combined analyses of kinship and FST suggest potential drivers of chaotic genetic patchiness in high gene‐flow populations
We combine kinship estimates with traditional F‐statistics to explain contemporary drivers of
population genetic differentiation despite high gene flow. We investigate range‐wide …
population genetic differentiation despite high gene flow. We investigate range‐wide …
Defining boundaries for ecosystem‐based management: A multispecies case study of marine connectivity across the Hawaiian archipelago
Determining the geographic scale at which to apply ecosystem‐based management (EBM)
has proven to be an obstacle for many marine conservation programs. Generalizations …
has proven to be an obstacle for many marine conservation programs. Generalizations …
Emergent patterns of population genetic structure for a coral reef community
KA Selkoe, OE Gaggiotti, ToBo Laboratory… - Molecular …, 2014 - Wiley Online Library
What shapes variation in genetic structure within a community of codistributed species is a
central but difficult question for the field of population genetics. With a focus on the isolated …
central but difficult question for the field of population genetics. With a focus on the isolated …
Evolving coral reef conservation with genetic information
Targeted conservation and management programs are crucial for mitigating anthropogenic
threats to declining biodiversity. Although evolutionary processes underpin extant patterns of …
threats to declining biodiversity. Although evolutionary processes underpin extant patterns of …
Global population genetic dynamics of a highly migratory, apex predator shark
Abstract Knowledge of genetic connectivity dynamics in the world's large‐bodied, highly
migratory, apex predator sharks across their global ranges is limited. One such species, the …
migratory, apex predator sharks across their global ranges is limited. One such species, the …
Genomics versus mtDNA for resolving stock structure in the silky shark (Carcharhinus falciformis)
DW Kraft, EE Conklin, EW Barba, M Hutchinson… - PeerJ, 2020 - peerj.com
Conservation genetic approaches for elasmobranchs have focused on regions of the
mitochondrial genome or a handful of nuclear microsatellites. High-throughput sequencing …
mitochondrial genome or a handful of nuclear microsatellites. High-throughput sequencing …