Through the eyes of creators: observing artificial molecular motors
Inspired by molecular motors in biology, there has been significant progress in building
artificial molecular motors, using a number of quite distinct approaches. As the constructs …
artificial molecular motors, using a number of quite distinct approaches. As the constructs …
Motility of an autonomous protein-based artificial motor that operates via a burnt-bridge principle
Inspired by biology, great progress has been made in creating artificial molecular motors.
However, the dream of harnessing proteins–the building blocks selected by nature–to …
However, the dream of harnessing proteins–the building blocks selected by nature–to …
Sterically driven current reversal in a molecular motor model
Simulations can help unravel the complicated ways in which molecular structure determines
function. Here, we use molecular simulations to show how slight alterations of a molecular …
function. Here, we use molecular simulations to show how slight alterations of a molecular …
The nanocaterpillar's random walk: diffusion with ligand–receptor contacts
Particles with ligand–receptor contacts bind and unbind fluctuating “legs” to surfaces, whose
fluctuations cause the particle to diffuse. Quantifying the diffusion of such “nanoscale …
fluctuations cause the particle to diffuse. Quantifying the diffusion of such “nanoscale …
Coarse-grained dynamics of transiently bound fast linkers
Transient bonds between fast linkers and slower particles are widespread in physical and
biological systems. Despite their diverse structure and function, a commonality is that the …
biological systems. Despite their diverse structure and function, a commonality is that the …
Within-host evolution of SARS-CoV-2: how often are de novo mutations transmitted from symptomatic infections?
CS Korosec, LM Wahl, JM Heffernan - Virus Evolution, 2024 - academic.oup.com
Despite a relatively low mutation rate, the large number of severe acute respiratory
syndrome coronavirus 2 (SARS-CoV-2) infections has allowed for substantial genetic …
syndrome coronavirus 2 (SARS-CoV-2) infections has allowed for substantial genetic …
Limits on the Precision of Catenane Molecular Motors: Insights from Thermodynamics and Molecular Dynamics Simulations
Thermodynamic uncertainty relations (TURs) relate precision to the dissipation rate, yet the
inequalities can be far from saturation. Indeed, in catenane molecular motor simulations, we …
inequalities can be far from saturation. Indeed, in catenane molecular motor simulations, we …
The sliding motility of the bacilliform virions of Influenza A viruses
Influenza A virus (IAV) infection relies on the action of the hemagglutinin (HA) and
neuraminidase (NA) membrane proteins. The HA ligands anchor the IAV virion to the cell's …
neuraminidase (NA) membrane proteins. The HA ligands anchor the IAV virion to the cell's …
Sliding across a surface: Particles with fixed and mobile ligands
J Lowensohn, L Stevens, D Goldstein… - The Journal of Chemical …, 2022 - pubs.aip.org
A quantitative model of the mobility of ligand-presenting particles at the interface is pivotal to
understanding important systems in biology and nanotechnology. In this work, we …
understanding important systems in biology and nanotechnology. In this work, we …
Burnt bridge ratchet motor force scales linearly with polyvalency: a computational study
AT Blanchard - Soft Matter, 2021 - pubs.rsc.org
Nano-and micro-scale burnt bridge ratchet motors, which translocate via “guide” molecules
that bind to and degrade a field of “fuel” molecules, have recently emerged in several …
that bind to and degrade a field of “fuel” molecules, have recently emerged in several …