From complex data to clear insights: visualizing molecular dynamics trajectories
Advances in simulations, combined with technological developments in high-performance
computing, have made it possible to produce a physically accurate dynamic representation …
computing, have made it possible to produce a physically accurate dynamic representation …
Visual exploration of large normal mode spaces to study protein flexibility
When studying the function of proteins, biochemists utilize normal mode decomposition to
enable the analysis of structural changes on time scales that are too long for molecular …
enable the analysis of structural changes on time scales that are too long for molecular …
Analyzing the similarity of protein domains by clustering Molecular Surface Maps
Many biochemical and biomedical applications such as protein engineering or drug design
are concerned with finding functionally similar proteins, however, this remains to be a …
are concerned with finding functionally similar proteins, however, this remains to be a …
[PDF][PDF] Protein Tunnel Reprojection for Physico-Chemical Property Analysis.
J Malzahn, B Kozlíková, T Ropinski - VCBM, 2017 - diglib.eg.org
Cavities are crucial for interactions of proteins with other molecules. While a variety of
different cavity types exists, tunnels in particular play an important role, as they enable a …
different cavity types exists, tunnels in particular play an important role, as they enable a …
BioMedical Visualization: Past Work, Current Trends, and Open Challenges
K Furmanová - Springer
Medicine and biology are important research fields with a significant impact on humans and
their health. In the last few decades, many visualization strategies have been proposed for …
their health. In the last few decades, many visualization strategies have been proposed for …
[PDF][PDF] Analyzing Protein Similarity by Clustering Molecular Surface Maps.
Many biochemical and biomedical applications like protein engineering or drug design are
concerned with finding functionally similar proteins, however, this remains to be a …
concerned with finding functionally similar proteins, however, this remains to be a …
[PDF][PDF] Molecular Sombreros: Abstract Visualization of Binding Sites within Proteins
B Kozlíková, L Linsen, PP Vázquez - 2019 - diglib.eg.org
We present a novel abstract visualization for the binding sites of proteins. Binding sites play
an essential role in enzymatic reactions and are, thus, often investigated in structural …
an essential role in enzymatic reactions and are, thus, often investigated in structural …
Vergleichende Visualisierung von Moleküloberflächen durch ähnlichkeitsbasiertes Clustering
T Baur - 2019 - elib.uni-stuttgart.de
Ziel dieser Arbeit ist die Umsetzung einer vergleichenden Visualisierung von
Moleküloberflächen durch ein ähnlichkeitsbasiertes Clustering mit 2D-Oberflächenkarten …
Moleküloberflächen durch ein ähnlichkeitsbasiertes Clustering mit 2D-Oberflächenkarten …
[PDF][PDF] Analysis and Visualization of Biomolecules
B Kozlıková - 2016 - is.muni.cz
All living organisms consist of biomolecules and understanding the complex processes and
interactions between them helps also to understand the reasons of their deficiencies and …
interactions between them helps also to understand the reasons of their deficiencies and …