Genomics and marker-assisted improvement of vegetable crops

I Simko, M Jia, J Venkatesh, BC Kang… - Critical Reviews in …, 2021 - Taylor & Francis
Vegetables are an integral part of the human diet worldwide. Traditional breeding
approaches have been used extensively to develop new cultivars of vegetables with …

New reference genome sequences of hot pepper reveal the massive evolution of plant disease-resistance genes by retroduplication

S Kim, J Park, SI Yeom, YM Kim, E Seo, KT Kim… - Genome biology, 2017 - Springer
Background Transposable elements are major evolutionary forces which can cause new
genome structure and species diversification. The role of transposable elements in the …

Molecular advancements in male sterility systems of Capsicum: A review

SK Jindal, MS Dhaliwal, OP Meena - Plant breeding, 2020 - Wiley Online Library
In recent years, plant molecular research on genetic mapping, gene tagging and cloning,
and marker‐assisted selection (MAS) have gained importance in crop improvement …

Development of a SNP array and its application to genetic mapping and diversity assessment in pepper (Capsicum spp.)

J Cheng, C Qin, X Tang, H Zhou, Y Hu, Z Zhao, J Cui… - Scientific Reports, 2016 - nature.com
The development and application of single nucleotide polymorphisms (SNPs) is in its
infancy for pepper. Here, a set of 15,000 SNPs were chosen from the resequencing data to …

Exploring horticultural traits and disease resistance in Capsicum baccatum through segmental introgression lines

J Jo, GW Kim, S Back, S Jang, Y Kim, K Han… - Theoretical and Applied …, 2023 - Springer
Key message Segmental introgression and advanced backcross lines were developed and
validated as important tools for improving agronomically important traits in pepper, offering …

Construction of a high density genetic map of an interspecific cross of Capsicum chinense and Capsicum annuum and QTL analysis of floral traits

Z Zhu, B Sun, J Wei, W Cai, Z Huang, C Chen, B Cao… - Scientific reports, 2019 - nature.com
The yield of pepper plants (Capsicum spp.) is their most important trait and is affected by the
flower number and flowering time. Capsicum annuum produces a single flower per node …

Aphid resistance in Capsicum maps to a locus containing LRR-RLK gene analogues

M Sun, RE Voorrips, W van't Westende… - Theoretical and Applied …, 2020 - Springer
Key message A QTL for aphid resistance on pepper chromosome 2 was identified and
validated. This QTL affects aphid survival and reproduction, and was fine mapped to a locus …

Development of fluidigm SNP type genotyping assays for marker-assisted breeding of chili pepper (Capsicum annuum L.)

H Kim, JB Yoon, J Lee - Horticultural Science & Technology, 2017 - koreascience.kr
Chili pepper (Capsicum annuum L.) is an economically important horticultural crop in Korea;
however, various diseases, including Phytophthora root rot, anthracnose, powdery mildew …

Genomic regions and candidate genes linked with Phytophthora capsici root rot resistance in chile pepper (Capsicum annuum L.)

DN Lozada, G Nunez, P Lujan, S Dura, D Coon… - BMC Plant …, 2021 - Springer
Background Phytophthora root rot, caused by Phytophthora capsici, is a major disease
affecting Capsicum production worldwide. A recombinant inbred line (RIL) population …

Genome-Wide Divergence and Linkage Disequilibrium Analyses for Capsicum baccatum Revealed by Genome-Anchored Single Nucleotide Polymorphisms

P Nimmakayala, VL Abburi, T Saminathan… - Frontiers in plant …, 2016 - frontiersin.org
Principal component analysis (PCA) with 36,621 polymorphic genome-anchored single
nucleotide polymorphisms (SNPs) identified collectively for Capsicum annuum and …