Marine fungi: A source of potential anticancer compounds

SK Deshmukh, V Prakash, N Ranjan - Frontiers in microbiology, 2018 - frontiersin.org
Metabolites from marine fungi have hogged the limelight in drug discovery because of their
promise as therapeutic agents. A number of metabolites related to marine fungi have been …

Applications of isothermal titration calorimetry in pure and applied research—survey of the literature from 2010

R Ghai, RJ Falconer, BM Collins - Journal of Molecular …, 2012 - Wiley Online Library
Isothermal titration calorimetry (ITC) is a biophysical technique for measuring the formation
and dissociation of molecular complexes and has become an invaluable tool in many …

Natural product DNA major groove binders

PL Hamilton, DP Arya - Natural product reports, 2012 - pubs.rsc.org
Covering: 1980 to 2011 Major groove recognition of DNA by proteins utilizes the variation in
hydrogen bond donor/acceptor content that makes DNA base-pairs distinguishable from one …

Structural insight for the recognition of G-quadruplex structure at human c-myc promoter sequence by flavonoid Quercetin

A Tawani, SK Mishra, A Kumar - Scientific reports, 2017 - nature.com
Small molecule ligands that could stabilize G-quadruplex structure formed at the promoter
region of human c-myc oncogene will regulate its expression in cancer cells. Flavonoids, a …

Evidences for Piperine inhibiting cancer by targeting human G-quadruplex DNA sequences

A Tawani, A Amanullah, A Mishra, A Kumar - Scientific reports, 2016 - nature.com
Piperine, a naturally occurring alkaloid, is well known as anti-oxidant, anti-mutagenic, anti-
tumor and anti-proliferative agent. Piperine exerts such pharmacological activities by …

An Acyclic Oligoheteroaryle That Discriminates Strongly between Diverse G‐Quadruplex Topologies

F Hamon, E Largy, A Guédin‐Beaurepaire… - Angewandte …, 2011 - Wiley Online Library
Quadruplex nucleic acids are secondary structures that may form in sequences containing
guanine repeats.[1] These structures are strongly suspected to interfere with the transfer and …

Message passing interface and multithreading hybrid for parallel molecular docking of large databases on petascale high performance computing machines

X Zhang, SE Wong… - Journal of computational …, 2013 - Wiley Online Library
A mixed parallel scheme that combines message passing interface (MPI) and multithreading
was implemented in the AutoDock Vina molecular docking program. The resulting program …

Synthesis and spectroscopic studies of the aminoglycoside (Neomycin)− Perylene conjugate binding to human telomeric DNA

L Xue, N Ranjan, DP Arya - Biochemistry, 2011 - ACS Publications
Synthesis of a novel perylene− neomycin conjugate (3) and the properties of its binding to
human telomeric G-quadruplex DNA, 5′-d [AG3 (T2AG3) 3](4), are reported. Various …

Neomycin− neomycin dimer: an all-carbohydrate scaffold with high affinity for AT-rich DNA duplexes

S Kumar, L Xue, DP Arya - Journal of the American Chemical …, 2011 - ACS Publications
A dimeric neomycin− neomycin conjugate 3 with a flexible linker, 2, 2′-(ethylenedioxy) bis
(ethylamine), has been synthesized and characterized. Dimer 3 can selectively bind to AT …

Thermodynamics of nucleic acid “shape readout” by an aminosugar

H Xi, E Davis, N Ranjan, L Xue, D Hyde-Volpe… - Biochemistry, 2011 - ACS Publications
Recognition of nucleic acids is important for our understanding of nucleic acid structure as
well as for our understanding of nucleic acid–protein interactions. In addition to the direct …