Embryonic timing, axial stem cells, chromatin dynamics, and the Hox clock

J Deschamps, D Duboule - Genes & development, 2017 - genesdev.cshlp.org
Collinear regulation of Hox genes in space and time has been an outstanding question ever
since the initial work of Ed Lewis in 1978. Here we discuss recent advances in our …

[HTML][HTML] The molecular basis of mammary gland development and epithelial differentiation

PF Slepicka, AVH Somasundara… - Seminars in cell & …, 2021 - Elsevier
Our understanding of the molecular events underpinning the development of mammalian
organ systems has been increasing rapidly in recent years. With the advent of new and …

The HoxD cluster is a dynamic and resilient TAD boundary controlling the segregation of antagonistic regulatory landscapes

E Rodríguez-Carballo, L Lopez-Delisle… - Genes & …, 2017 - genesdev.cshlp.org
The mammalian HoxD cluster lies between two topologically associating domains (TADs)
matching distinct enhancer-rich regulatory landscapes. During limb development, the …

HOX genes function in Breast Cancer development

SA de Bessa Garcia, M Araújo, T Pereira… - … et Biophysica Acta (BBA …, 2020 - Elsevier
Breast cancer develops in the mammary glands during mammalian adulthood and is
considered the second most common type of human carcinoma and the most incident and …

[HTML][HTML] Comprehensive analysis of a cis-regulatory region reveals pleiotropy in enhancer function

EPB Noon, G Sabarís, DM Ortiz, J Sager, A Liebowitz… - Cell reports, 2018 - cell.com
Developmental genes can have complex cis-regulatory regions with multiple enhancers.
Early work revealed remarkable modularity of enhancers, whereby distinct DNA regions …

The placenta as a model for understanding the origin and evolution of vertebrate organs

OW Griffith, GP Wagner - Nature ecology & evolution, 2017 - nature.com
How organs originate and evolve is a question fundamental to understanding the evolution
of complex multicellular life forms. Vertebrates have a relatively standard body plan with …

Actors with multiple roles: pleiotropic enhancers and the paradigm of enhancer modularity

G Sabarís, I Laiker, EPB Noon, N Frankel - Trends in Genetics, 2019 - cell.com
The current paradigm in the field of gene regulation postulates that regulatory information for
generating gene expression is organized into modules (enhancers), each containing the …

Chromatin topology and the timing of enhancer function at the HoxD locus

E Rodríguez-Carballo… - Proceedings of the …, 2020 - National Acad Sciences
The HoxD gene cluster is critical for proper limb formation in tetrapods. In the emerging limb
buds, different subgroups of Hoxd genes respond first to a proximal regulatory signal, then to …

Polycomb Repressive Complexes in Hox Gene Regulation: Silencing and Beyond: The Functional Dynamics of Polycomb Repressive Complexes in Hox Gene …

C Gentile, M Kmita - BioEssays, 2020 - Wiley Online Library
The coordinated expression of the Hox gene family encoding transcription factors is critical
for proper embryonic development and patterning. Major efforts have thus been dedicated to …

Sequential in cis mutagenesis in vivo reveals various functions for CTCF sites at the mouse HoxD cluster

AR Amândio, L Beccari, L Lopez-Delisle… - Genes & …, 2021 - genesdev.cshlp.org
Mammalian Hox gene clusters contain a range of CTCF binding sites. In addition to their
importance in organizing a TAD border, which isolates the most posterior genes from the …