Homoeologous exchanges, segmental allopolyploidy, and polyploid genome evolution

AS Mason, JF Wendel - Frontiers in Genetics, 2020 - frontiersin.org
Polyploidy is a major force in plant evolution and speciation. In newly formed allopolyploids,
pairing between related chromosomes from different subgenomes (homoeologous …

Patterns, mechanisms, and consequences of homoeologous exchange in allopolyploid angiosperms: a genomic and epigenomic perspective

SK Deb, PP Edger, JC Pires, MR McKain - New Phytologist, 2023 - Wiley Online Library
Allopolyploids result from hybridization between different evolutionary lineages coupled with
genome doubling. Homoeologous chromosomes (chromosomes with common shared …

Homoeologous exchange is a major cause of gene presence/absence variation in the amphidiploid Brassica napus

B Hurgobin, AA Golicz, PE Bayer… - Plant biotechnology …, 2018 - Wiley Online Library
Homoeologous exchanges (HE s) have been shown to generate novel gene combinations
and phenotypes in a range of polyploid species. Gene presence/absence variation (PAV) is …

The high‐quality genome of Brassica napus cultivar 'ZS11' reveals the introgression history in semi‐winter morphotype

F Sun, G Fan, Q Hu, Y Zhou, M Guan, C Tong… - The Plant …, 2017 - Wiley Online Library
Allotetraploid oilseed rape (Brassica napus L.) is an agriculturally important crop. Cultivation
and breeding of B. napus by humans has resulted in numerous genetically diverse …

Homoeolog expression bias and expression level dominance in allopolyploids

CE Grover, JP Gallagher, EP Szadkowski, MJ Yoo… - New Phytologist, 2012 - JSTOR
Polyploidy is now recognized as a characteristic feature of all angiosperm genomes (Jiao et
al., 2011), and remains an important speciation process today (Wendel, 2000; Comai, 2005; …

The final piece of the Triangle of U: Evolution of the tetraploid Brassica carinata genome

WC Yim, ML Swain, D Ma, H An, KA Bird… - The Plant …, 2022 - academic.oup.com
Ethiopian mustard (Brassica carinata) is an ancient crop with remarkable stress resilience
and a desirable seed fatty acid profile for biofuel uses. Brassica carinata is one of six …

Persistent whole-chromosome aneuploidy is generally associated with nascent allohexaploid wheat

H Zhang, Y Bian, X Gou, B Zhu, C Xu… - Proceedings of the …, 2013 - National Acad Sciences
Allopolyploidization has been a driving force in plant evolution. Formation of common wheat
(Triticum aestivum L.) represents a classic example of successful speciation via …

Diversity and determinants of meiotic recombination landscapes

M Zelkowski, MA Olson, M Wang, W Pawlowski - Trends in Genetics, 2019 - cell.com
Despite the universal importance of meiotic recombination for generating genetic diversity,
numbers and distribution of recombination events along chromosomes vary among species …

Genome‐wide association analyses reveal complex genetic architecture underlying natural variation for flowering time in canola

H Raman, R Raman, N Coombes, J Song… - Plant, Cell & …, 2016 - Wiley Online Library
Optimum flowering time is the key to maximize canola production in order to meet global
demand of vegetable oil, biodiesel and canola‐meal. We reveal extensive variation in …

Homoeologous exchanges cause extensive dosage‐dependent gene expression changes in an allopolyploid crop

A Lloyd, A Blary, D Charif, C Charpentier… - New …, 2018 - Wiley Online Library
Structural variation is a major source of genetic diversity and an important substrate for
selection. In allopolyploids, homoeologous exchanges (ie between the constituent …