Quantification in proteomics through stable isotope coding: a review

S Julka, F Regnier - Journal of proteome research, 2004 - ACS Publications
This review focuses on techniques for quantification and identification in proteomics by
stable isotope coding. Methods are examined for analyzing expression, post-translational …

Challenges and prospects of plant proteomics

KJ van Wijk - Plant Physiology, 2001 - academic.oup.com
Proteomics has been defined as “the systematic analysis of the protein population in a
tissue, cell, or subcellular compartment.” Over the last 2 to 3 years, proteomics has …

[图书][B] A handbook of derivatives for mass spectrometry

V Zaikin, JM Halket - 2009 - books.google.com
Chemical derivatisation of functional groups has proved popular since the beginning of
organic mass spectrometry as a means to enhance the stability and volatility of the analytes …

Alloxan is an inhibitor of the enzyme O-linked N-acetylglucosamine transferase

RJ Konrad, F Zhang, JE Hale, MD Knierman… - Biochemical and …, 2002 - Elsevier
We have previously shown that diabetogenic antibiotic streptozotocin (STZ), an analog of N-
acetylglucosamine (GlcNAc), inhibits the enzyme O-GlcNAc-selective N-acetyl-β-d …

Enrichment and analysis of peptide subsets using fluorous affinity tags and mass spectrometry

SM Brittain, SB Ficarro, A Brock, EC Peters - Nature biotechnology, 2005 - nature.com
Although mass spectrometry has become a powerful tool for the functional analysis of
biological systems, complete proteome characterization cannot yet be achieved. Instead, the …

De novo peptide sequencing and quantitative profiling of complex protein mixtures using mass-coded abundance tagging

G Cagney, A Emili - Nature biotechnology, 2002 - nature.com
Proteomic studies require efficient, robust, and practical methods of characterizing proteins
present in biological samples. Here we describe an integrated strategy for systematic …

Proteomic Insights into Metabolic Adaptations in Alcanivorax borkumensis Induced by Alkane Utilization

JS Sabirova, M Ferrer, D Regenhardt… - Journal of …, 2006 - Am Soc Microbiol
Alcanivorax borkumensis is a ubiquitous marine petroleum oil-degrading bacterium with an
unusual physiology specialized for alkane metabolism. This “hydrocarbonoclastic” …

Challenges in mass spectrometry‐based proteomics

J Reinders, U Lewandrowski, J Moebius… - …, 2004 - Wiley Online Library
During the last decade, protein analysis and proteomics have been established as new tools
for understanding various biological problems. As the identification of proteins after classical …

Absolute multiplexed quantitative analysis of protein expression during muscle development using QconCAT

J Rivers, DM Simpson, DHL Robertson… - Molecular & Cellular …, 2007 - ASBMB
Stable isotope-labeled proteotypic peptides are used as surrogate standards for absolute
quantification of proteins in proteomics. However, a stable isotope-labeled peptide has to be …

A simplified procedure for the reduction and alkylation of cysteine residues in proteins prior to proteolytic digestion and mass spectral analysis

JE Hale, JP Butler, V Gelfanova, JS You… - Analytical …, 2004 - Elsevier
A procedure for reduction and alkylation of cysteine residues in proteins was developed
using the volatile reagents triethylphosphine and iodoethanol. These reagents may be used …