Diagnosis of invasive fungal infections: challenges and recent developments
W Fang, J Wu, M Cheng, X Zhu, M Du, C Chen… - Journal of biomedical …, 2023 - Springer
Background The global burden of invasive fungal infections (IFIs) has shown an upsurge in
recent years due to the higher load of immunocompromised patients suffering from various …
recent years due to the higher load of immunocompromised patients suffering from various …
Best practices in metabarcoding of fungi: from experimental design to results
The development of high‐throughput sequencing (HTS) technologies has greatly improved
our capacity to identify fungi and unveil their ecological roles across a variety of ecosystems …
our capacity to identify fungi and unveil their ecological roles across a variety of ecosystems …
The UNITE database for molecular identification and taxonomic communication of fungi and other eukaryotes: sequences, taxa and classifications reconsidered
Abstract UNITE (https://unite. ut. ee) is a web-based database and sequence management
environment for molecular identification of eukaryotes. It targets the nuclear ribosomal …
environment for molecular identification of eukaryotes. It targets the nuclear ribosomal …
The numbers of fungi: Contributions from traditional taxonomic studies and challenges of metabarcoding
The global diversity of fungi has been estimated using several different approaches. There is
somewhere between 2–11 million estimated species, but the number of formally described …
somewhere between 2–11 million estimated species, but the number of formally described …
[HTML][HTML] Past, present, and future perspectives of environmental DNA (eDNA) metabarcoding: A systematic review in methods, monitoring, and applications of global …
KM Ruppert, RJ Kline, MS Rahman - Global Ecology and Conservation, 2019 - Elsevier
Environmental DNA (eDNA) metabarcoding is a novel method of assessing biodiversity
wherein samples are taken from the environment via water, sediment or air from which DNA …
wherein samples are taken from the environment via water, sediment or air from which DNA …
[HTML][HTML] Airborne environmental DNA for terrestrial vertebrate community monitoring
Biodiversity monitoring at the community scale is a critical element of assessing and
studying species distributions, ecology, diversity, and movements, and it is key to …
studying species distributions, ecology, diversity, and movements, and it is key to …
Environmental DNA metabarcoding: Transforming how we survey animal and plant communities
The genomic revolution has fundamentally changed how we survey biodiversity on earth.
High‐throughput sequencing (“HTS”) platforms now enable the rapid sequencing of DNA …
High‐throughput sequencing (“HTS”) platforms now enable the rapid sequencing of DNA …
Microbiome composition and function in aquatic vertebrates: small organisms making big impacts on aquatic animal health
L Sehnal, E Brammer-Robbins… - Frontiers in …, 2021 - frontiersin.org
Aquatic ecosystems are under increasing stress from global anthropogenic and natural
changes, including climate change, eutrophication, ocean acidification, and pollution. In this …
changes, including climate change, eutrophication, ocean acidification, and pollution. In this …
MiFish metabarcoding: a high-throughput approach for simultaneous detection of multiple fish species from environmental DNA and other samples
We reviewed the current methodology and practices of the DNA metabarcoding approach
using a universal PCR primer pair MiFish, which co-amplifies a short fragment of fish DNA …
using a universal PCR primer pair MiFish, which co-amplifies a short fragment of fish DNA …
Algorithm for post-clustering curation of DNA amplicon data yields reliable biodiversity estimates
DNA metabarcoding is promising for cost-effective biodiversity monitoring, but reliable
diversity estimates are difficult to achieve and validate. Here we present and validate a …
diversity estimates are difficult to achieve and validate. Here we present and validate a …