A comparison of marker-based estimators of inbreeding and inbreeding depression

A Caballero, A Fernández, B Villanueva… - Genetics Selection …, 2022 - Springer
Background The availability of genome-wide marker data allows estimation of inbreeding
coefficients (F, the probability of identity-by-descent, IBD) and, in turn, estimation of the rate …

Comparing pedigree and genomic inbreeding coefficients, and inbreeding depression of reproductive traits in Japanese Black cattle

M Nishio, K Inoue, S Ogawa, K Ichinoseki, A Arakawa… - BMC genomics, 2023 - Springer
Background Pedigree-based inbreeding coefficients have been generally included in
statistical models for genetic evaluation of Japanese Black cattle. The use of genomic data is …

[HTML][HTML] Impact of inbreeding on production, fertility, and health traits in German Holstein dairy cattle utilizing various inbreeding estimators

J Mugambe, RH Ahmed, G Thaller… - Journal of Dairy …, 2024 - Elsevier
In dairy cattle production, it is important to understand how inbreeding affects production,
fertility, and health traits. However, there is still limited use of genomic information to …

[HTML][HTML] Genome-wide association and functional genomic analyses for various hoof health traits in North American Holstein cattle

LPBS Junior, LFB Pinto, VAR Cruz, GA Oliveira Jr… - Journal of Dairy …, 2024 - Elsevier
Hoof diseases are a major welfare and economic issue in the global dairy cattle production
industry, which can be minimized through improved management and breeding practices …

Genomic inbreeding coefficients using imputed genotypes: assessing differences among SNP panels in Holstein-Friesian dairy cows

C Dadousis, M Ablondi, C Cipolat-Gotet… - Frontiers in veterinary …, 2023 - frontiersin.org
The objective of this study was to evaluate the effect of imputation of single nucleotide
polymorphisms (SNP) on the estimation of genomic inbreeding coefficients. Imputed …

[HTML][HTML] 基于低深度全基因组测序分析内江猪群体结构和遗传多样性

赵真坚, 王书杰, 陈栋, 姬祥, 申琦, 余杨, 崔晟頔… - 畜牧兽医学报, 2023 - html.rhhz.net
旨在更好的了解内江猪群体结构和遗传多样性, 更好的保护和利用内江猪遗传资源.
本研究基于低深度全基因组测序, 检测了133 头(12 头公猪, 121 头母猪) 内江猪的SNP …

[HTML][HTML] Genomic and Conventional Inbreeding Coefficient Estimation Using Different Estimator Models in Korean Duroc, Landrace, and Yorkshire Breeds Using 70K …

KT Mekonnen, DH Lee, YG Cho, AY Son, KS Seo - Animals, 2024 - mdpi.com
Simple Summary Inbreeding increases homozygosity, often leading to the co-expression of
recessive deleterious alleles and a reduction in genetic diversity. Traditional methods …

[PDF][PDF] Commonly used genomic estimators of individual inbreeding in livestock.

A Halvoník, N Moravčíková… - Czech Journal of …, 2024 - agriculturejournals.cz
Management of inbreeding is one of the crucial parts of breeding programs in livestock
populations. Traditionally, the inbreeding coefficient is calculated using pedigree data; …

Genomic approach to manage genetic variability in dairy farms

C Punturiero, R Milanesi, F Bernini… - Italian Journal of …, 2023 - Taylor & Francis
In this study we investigated the genetic variability, the inbreeding and allele frequencies of
monogenic traits in seven herds of Holstein breed and provided insight to farmers on the …

[HTML][HTML] Assessment of genetic diversity, inbreeding, and collection completeness of Jersey bulls in the US National Animal Germplasm Program

K Srikanth, MA Jaafar, M Neupane, HB Zaabza… - Journal of Dairy …, 2024 - Elsevier
Genomic selection and extensive use of a few elite bulls through artificial insemination are
leading to reduced genetic diversity in Jersey cattle. Conservation of genetic diversity …