DNA methylation-based predictors of health: applications and statistical considerations

PD Yousefi, M Suderman, R Langdon… - Nature Reviews …, 2022 - nature.com
DNA methylation data have become a valuable source of information for biomarker
development, because, unlike static genetic risk estimates, DNA methylation varies …

A scoping review of machine learning in psychotherapy research

K Aafjes-van Doorn, C Kamsteeg, J Bate… - Psychotherapy …, 2021 - Taylor & Francis
Abstract Machine learning (ML) offers robust statistical and probabilistic techniques that can
help to make sense of large amounts of data. This scoping review paper aims to broadly …

COVID-19 vaccination intention in the UK: results from the COVID-19 vaccination acceptability study (CoVAccS), a nationally representative cross-sectional survey

SM Sherman, LE Smith, J Sim, R Amlôt… - Human vaccines & …, 2021 - Taylor & Francis
To investigate factors associated with intention to be vaccinated against COVID-19 we
conducted a cross-sectional survey of 1,500 UK adults, recruited from an existing online …

Calculating the sample size required for developing a clinical prediction model

RD Riley, J Ensor, KIE Snell, FE Harrell, GP Martin… - Bmj, 2020 - bmj.com
Clinical prediction models aim to predict outcomes in individuals, to inform diagnosis or
prognosis in healthcare. Hundreds of prediction models are published in the medical …

Minimum sample size for external validation of a clinical prediction model with a binary outcome

RD Riley, TPA Debray, GS Collins, L Archer… - Statistics in …, 2021 - Wiley Online Library
In prediction model research, external validation is needed to examine an existing model's
performance using data independent to that for model development. Current external …

PROBAST: a tool to assess risk of bias and applicability of prediction model studies: explanation and elaboration

KGM Moons, RF Wolff, RD Riley, PF Whiting… - Annals of internal …, 2019 - acpjournals.org
Prediction models in health care use predictors to estimate for an individual the probability
that a condition or disease is already present (diagnostic model) or will occur in the future …

Minimum sample size for developing a multivariable prediction model: PART II‐binary and time‐to‐event outcomes

RD Riley, KIE Snell, J Ensor, DL Burke… - Statistics in …, 2019 - Wiley Online Library
When designing a study to develop a new prediction model with binary or time‐to‐event
outcomes, researchers should ensure their sample size is adequate in terms of the number …

A checklist for statistical assessment of medical papers (the CHAMP statement): explanation and elaboration

MA Mansournia, GS Collins, RO Nielsen… - British journal of sports …, 2021 - bjsm.bmj.com
Misuse of statistics in medical and sports science research is common and may lead to
detrimental consequences to healthcare. Many authors, editors and peer reviewers of …

[HTML][HTML] Development and reporting of prediction models: guidance for authors from editors of respiratory, sleep, and critical care journals

DE Leisman, MO Harhay, DJ Lederer… - Critical care …, 2020 - journals.lww.com
Prediction models aim to use available data to predict a health state or outcome that has not
yet been observed. Prediction is primarily relevant to clinical practice, but is also used in …

Intratumoral heterogeneity and clonal evolution in liver cancer

B Losic, AJ Craig, C Villacorta-Martin… - Nature …, 2020 - nature.com
Clonal evolution of a tumor ecosystem depends on different selection pressures that are
principally immune and treatment mediated. We integrate RNA-seq, DNA sequencing, TCR …