Speeding with control: codon usage, tRNAs, and ribosomes
EM Novoa, LR de Pouplana - Trends in Genetics, 2012 - cell.com
Codon usage and tRNA abundance are critical parameters for gene synthesis. However, the
forces determining codon usage bias within genomes and between organisms, as well as …
forces determining codon usage bias within genomes and between organisms, as well as …
Physical principles and visual-OMP software for optimal PCR design
J SantaLucia - PCR primer design, 2007 - Springer
The physical principles of DNA hybridization and folding are described within the context of
how they are important for designing optimal PCRs. The multi-state equilibrium model for …
how they are important for designing optimal PCRs. The multi-state equilibrium model for …
3D mapping and accelerated super-resolution imaging of the human genome using in situ sequencing
There is a need for methods that can image chromosomes with genome-wide coverage, as
well as greater genomic and optical resolution. We introduce OligoFISSEQ, a suite of three …
well as greater genomic and optical resolution. We introduce OligoFISSEQ, a suite of three …
Second-generation DNA-templated macrocycle libraries for the discovery of bioactive small molecules
DNA-encoded libraries have emerged as a widely used resource for the discovery of
bioactive small molecules, and offer substantial advantages compared with conventional …
bioactive small molecules, and offer substantial advantages compared with conventional …
Detection of low-frequency mutations in clinical samples by increasing mutation abundance via the excision of wild-type sequences
W Chen, H Xu, S Dai, J Wang, Z Yang, Y Jin… - Nature biomedical …, 2023 - nature.com
The efficiency of DNA-enrichment techniques is often insufficient to detect mutations that
occur at low frequencies. Here we report a DNA-excision method for the detection of low …
occur at low frequencies. Here we report a DNA-excision method for the detection of low …
[HTML][HTML] Java web tools for PCR, in silico PCR, and oligonucleotide assembly and analysis
The polymerase chain reaction is fundamental to molecular biology and is the most
important practical molecular technique for the research laboratory. We have developed and …
important practical molecular technique for the research laboratory. We have developed and …
Paired end sequencing
(*) Netleei subJeet to any dlselalmeri the term ofthls Pelicic, v. et al,(2000) J. Bacteriol. 182:
5391-5398. patent is extended or adjusted under 35 Yao, M. AndKow, YW.(1995) J. Biol …
5391-5398. patent is extended or adjusted under 35 Yao, M. AndKow, YW.(1995) J. Biol …
Guide RNAs containing universal bases enable Cas9/Cas12a recognition of polymorphic sequences
CRISPR/Cas complexes enable precise gene editing in a wide variety of organisms. While
the rigid identification of DNA sequences by these systems minimizes the potential for off …
the rigid identification of DNA sequences by these systems minimizes the potential for off …
Dual priming oligonucleotide system for the multiplex detection of respiratory viruses and SNP genotyping of CYP2C19 gene
JY Chun, KJ Kim, IT Hwang, YJ Kim… - Nucleic acids …, 2007 - academic.oup.com
Successful PCR starts with proper priming between an oligonucleotide primer and the
template DNA. However, the inevitable risk of mismatched priming cannot be avoided in the …
template DNA. However, the inevitable risk of mismatched priming cannot be avoided in the …
Analysis of 16S rRNA primer systems for profiling of thermophilic microbial communities
AY Merkel, IY Tarnovetskii, OA Podosokorskaya… - Microbiology, 2019 - Springer
Thermophilic microorganisms are of special interest for phylogenetics and research in
prokaryotic evolution, since many of them belong to deep branches of the tree of life. For this …
prokaryotic evolution, since many of them belong to deep branches of the tree of life. For this …