[HTML][HTML] Challenges and Opportunities for Immunoprofiling Using a Spatial High-Plex Technology: The NanoString GeoMx® Digital Spatial Profiler
Characterization of the tumor microenvironment through immunoprofiling has become an
essential resource for the understanding of the complex immune cell interactions and the …
essential resource for the understanding of the complex immune cell interactions and the …
[HTML][HTML] Spatial transcriptomics in neuroscience
N Jung, TK Kim - Experimental & Molecular Medicine, 2023 - nature.com
The brain is one of the most complex living tissue types and is composed of an exceptional
diversity of cell types displaying unique functional connectivity. Single-cell RNA sequencing …
diversity of cell types displaying unique functional connectivity. Single-cell RNA sequencing …
[HTML][HTML] TACCO unifies annotation transfer and decomposition of cell identities for single-cell and spatial omics
Transferring annotations of single-cell-, spatial-and multi-omics data is often challenging
owing both to technical limitations, such as low spatial resolution or high dropout fraction …
owing both to technical limitations, such as low spatial resolution or high dropout fraction …
Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing
J Cao, Z Zheng, D Sun, X Chen, R Cheng, T Lv… - Nature …, 2024 - nature.com
Spatial transcriptomics technologies with high resolution often lack high sensitivity in mRNA
detection. Here we report a dendrimeric DNA coordinate barcoding design for spatial RNA …
detection. Here we report a dendrimeric DNA coordinate barcoding design for spatial RNA …
[HTML][HTML] Probabilistic embedding, clustering, and alignment for integrating spatial transcriptomics data with PRECAST
Spatially resolved transcriptomics involves a set of emerging technologies that enable the
transcriptomic profiling of tissues with the physical location of expressions. Although a …
transcriptomic profiling of tissues with the physical location of expressions. Although a …
[HTML][HTML] ER stress transforms random olfactory receptor choice into axon targeting precision
HJ Shayya, JK Kahiapo, R Duffié, KS Lehmann… - Cell, 2022 - cell.com
Olfactory sensory neurons (OSNs) convert the stochastic choice of one of> 1,000 olfactory
receptor (OR) genes into precise and stereotyped axon targeting of OR-specific glomeruli in …
receptor (OR) genes into precise and stereotyped axon targeting of OR-specific glomeruli in …
Mapping odorant sensitivities reveals a sparse but structured representation of olfactory chemical space by sensory input to the mouse olfactory bulb
In olfactory systems, convergence of sensory neurons onto glomeruli generates a map of
odorant receptor identity. How glomerular maps relate to sensory space remains unclear …
odorant receptor identity. How glomerular maps relate to sensory space remains unclear …
Chronic interleukin‐13 expression in mouse olfactory mucosa results in regional aneuronal epithelium
A Saraswathula, MM Liu, H Kulaga… - International forum of …, 2023 - Wiley Online Library
Background Olfactory dysfunction is highly associated with chronic rhinosinusitis with nasal
polyps (CRSwNP), and the severity of loss has been linked with biomarkers of type 2 …
polyps (CRSwNP), and the severity of loss has been linked with biomarkers of type 2 …
[HTML][HTML] Glia cells control olfactory neurogenesis by fine-tuning CXCL12
A Dietz, K Senf, J Karius, R Stumm, EM Neuhaus - Cells, 2023 - mdpi.com
Olfaction depends on lifelong production of sensory neurons from CXCR4 expressing
neurogenic stem cells. Signaling by CXCR4 depends on the concentration of CXCL12 …
neurogenic stem cells. Signaling by CXCR4 depends on the concentration of CXCL12 …
The IL‐4–IL‐4Rα axis modulates olfactory neuroimmune signaling to induce loss of smell
Background: Loss of smell is a part of the diagnostic criteria for CRSwNP. Although the
mechanistic understanding is poor, inhibition of IL-4Rα and IL-4/IL-13 signaling improves …
mechanistic understanding is poor, inhibition of IL-4Rα and IL-4/IL-13 signaling improves …