[HTML][HTML] Challenges and Opportunities for Immunoprofiling Using a Spatial High-Plex Technology: The NanoString GeoMx® Digital Spatial Profiler

S Hernandez, R Lazcano, A Serrano, S Powell… - Frontiers in …, 2022 - frontiersin.org
Characterization of the tumor microenvironment through immunoprofiling has become an
essential resource for the understanding of the complex immune cell interactions and the …

[HTML][HTML] Spatial transcriptomics in neuroscience

N Jung, TK Kim - Experimental & Molecular Medicine, 2023 - nature.com
The brain is one of the most complex living tissue types and is composed of an exceptional
diversity of cell types displaying unique functional connectivity. Single-cell RNA sequencing …

[HTML][HTML] TACCO unifies annotation transfer and decomposition of cell identities for single-cell and spatial omics

S Mages, N Moriel, I Avraham-Davidi, E Murray… - Nature …, 2023 - nature.com
Transferring annotations of single-cell-, spatial-and multi-omics data is often challenging
owing both to technical limitations, such as low spatial resolution or high dropout fraction …

Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing

J Cao, Z Zheng, D Sun, X Chen, R Cheng, T Lv… - Nature …, 2024 - nature.com
Spatial transcriptomics technologies with high resolution often lack high sensitivity in mRNA
detection. Here we report a dendrimeric DNA coordinate barcoding design for spatial RNA …

[HTML][HTML] Probabilistic embedding, clustering, and alignment for integrating spatial transcriptomics data with PRECAST

W Liu, X Liao, Z Luo, Y Yang, MC Lau, Y Jiao… - Nature …, 2023 - nature.com
Spatially resolved transcriptomics involves a set of emerging technologies that enable the
transcriptomic profiling of tissues with the physical location of expressions. Although a …

[HTML][HTML] ER stress transforms random olfactory receptor choice into axon targeting precision

HJ Shayya, JK Kahiapo, R Duffié, KS Lehmann… - Cell, 2022 - cell.com
Olfactory sensory neurons (OSNs) convert the stochastic choice of one of> 1,000 olfactory
receptor (OR) genes into precise and stereotyped axon targeting of OR-specific glomeruli in …

Mapping odorant sensitivities reveals a sparse but structured representation of olfactory chemical space by sensory input to the mouse olfactory bulb

SD Burton, A Brown, TP Eiting, IA Youngstrom, TC Rust… - Elife, 2022 - elifesciences.org
In olfactory systems, convergence of sensory neurons onto glomeruli generates a map of
odorant receptor identity. How glomerular maps relate to sensory space remains unclear …

Chronic interleukin‐13 expression in mouse olfactory mucosa results in regional aneuronal epithelium

A Saraswathula, MM Liu, H Kulaga… - International forum of …, 2023 - Wiley Online Library
Background Olfactory dysfunction is highly associated with chronic rhinosinusitis with nasal
polyps (CRSwNP), and the severity of loss has been linked with biomarkers of type 2 …

[HTML][HTML] Glia cells control olfactory neurogenesis by fine-tuning CXCL12

A Dietz, K Senf, J Karius, R Stumm, EM Neuhaus - Cells, 2023 - mdpi.com
Olfaction depends on lifelong production of sensory neurons from CXCR4 expressing
neurogenic stem cells. Signaling by CXCR4 depends on the concentration of CXCL12 …

The IL‐4–IL‐4Rα axis modulates olfactory neuroimmune signaling to induce loss of smell

Y Hara, MK Jha, JY Huang, Y Han, IM Langohr… - Allergy, 2024 - Wiley Online Library
Background: Loss of smell is a part of the diagnostic criteria for CRSwNP. Although the
mechanistic understanding is poor, inhibition of IL-4Rα and IL-4/IL-13 signaling improves …