Twenty years of plant genome sequencing: achievements and challenges
Y Sun, L Shang, QH Zhu, L Fan, L Guo - Trends in Plant Science, 2022 - cell.com
Publication of the complete genome sequence of Arabidopsis thaliana, the first plant
reference genome, in December 2000 heralded the beginning of the plant genome era …
reference genome, in December 2000 heralded the beginning of the plant genome era …
De novo domestication: an alternative route toward new crops for the future
Current global agricultural production must feed over 7 billion people. However, productivity
varies greatly across the globe and is under threat from both increased competitions for land …
varies greatly across the globe and is under threat from both increased competitions for land …
Pangenomic analysis identifies structural variation associated with heat tolerance in pearl millet
Pearl millet is an important cereal crop worldwide and shows superior heat tolerance. Here,
we developed a graph-based pan-genome by assembling ten chromosomal genomes with …
we developed a graph-based pan-genome by assembling ten chromosomal genomes with …
[HTML][HTML] A route to de novo domestication of wild allotetraploid rice
H Yu, T Lin, X Meng, H Du, J Zhang, G Liu, M Chen… - Cell, 2021 - cell.com
Cultivated rice varieties are all diploid, and polyploidization of rice has long been desired
because of its advantages in genome buffering, vigorousness, and environmental …
because of its advantages in genome buffering, vigorousness, and environmental …
Haplotype-resolved genome assembly provides insights into evolutionary history of the tea plant Camellia sinensis
Tea is an important global beverage crop and is largely clonally propagated. Despite
previous studies on the species, its genetic and evolutionary history deserves further …
previous studies on the species, its genetic and evolutionary history deserves further …
Analyses of a chromosome-scale genome assembly reveal the origin and evolution of cultivated chrysanthemum
Abstract Chrysanthemum (Chrysanthemum morifolium Ramat.) is a globally important
ornamental plant with great economic, cultural, and symbolic value. However, research on …
ornamental plant with great economic, cultural, and symbolic value. However, research on …
Allele-aware chromosome-level genome assembly and efficient transgene-free genome editing for the autotetraploid cultivated alfalfa
Artificially improving traits of cultivated alfalfa (Medicago sativa L.), one of the most important
forage crops, is challenging due to the lack of a reference genome and an efficient genome …
forage crops, is challenging due to the lack of a reference genome and an efficient genome …
Assembly of allele-aware, chromosomal-scale autopolyploid genomes based on Hi-C data
Construction of chromosome-level assembly is a vital step in achieving the goal of a
'Platinum'genome, but it remains a major challenge to assemble and anchor sequences to …
'Platinum'genome, but it remains a major challenge to assemble and anchor sequences to …
Integrating Hi-C links with assembly graphs for chromosome-scale assembly
Long-read sequencing and novel long-range assays have revolutionized de novo genome
assembly by automating the reconstruction of reference-quality genomes. In particular, Hi-C …
assembly by automating the reconstruction of reference-quality genomes. In particular, Hi-C …
Haplotype-resolved genome analyses of a heterozygous diploid potato
Potato (Solanum tuberosum L.) is the most important tuber crop worldwide. Efforts are
underway to transform the crop from a clonally propagated tetraploid into a seed …
underway to transform the crop from a clonally propagated tetraploid into a seed …