[HTML][HTML] lincRNAs: genomics, evolution, and mechanisms
Long intervening noncoding RNAs (lincRNAs) are transcribed from thousands of loci in
mammalian genomes and might play widespread roles in gene regulation and other cellular …
mammalian genomes and might play widespread roles in gene regulation and other cellular …
Topology of mammalian developmental enhancers and their regulatory landscapes
How a complex animal can arise from a fertilized egg is one of the oldest and most
fascinating questions of biology, the answer to which is encoded in the genome. Body shape …
fascinating questions of biology, the answer to which is encoded in the genome. Body shape …
Evolutionary constraint and innovation across hundreds of placental mammals
Zoonomia is the largest comparative genomics resource for mammals produced to date. By
aligning genomes for 240 species, we identify bases that, when mutated, are likely to affect …
aligning genomes for 240 species, we identify bases that, when mutated, are likely to affect …
[HTML][HTML] A cross-disorder dosage sensitivity map of the human genome
Rare copy-number variants (rCNVs) include deletions and duplications that occur
infrequently in the global human population and can confer substantial risk for disease. In …
infrequently in the global human population and can confer substantial risk for disease. In …
Functional and topological characteristics of mammalian regulatory domains
Long-range regulatory interactions play an important role in shaping gene-expression
programs. However, the genomic features that organize these activities are still poorly …
programs. However, the genomic features that organize these activities are still poorly …
[HTML][HTML] Long non-coding RNAs as a source of new peptides
Deep transcriptome sequencing has revealed the existence of many transcripts that lack
long or conserved open reading frames (ORFs) and which have been termed long non …
long or conserved open reading frames (ORFs) and which have been termed long non …
Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes
A Siepel, G Bejerano, JS Pedersen… - Genome …, 2005 - genome.cshlp.org
We have conducted a comprehensive search for conserved elements in vertebrate
genomes, using genome-wide multiple alignments of five vertebrate species (human …
genomes, using genome-wide multiple alignments of five vertebrate species (human …
Domain organization of human chromosomes revealed by mapping of nuclear lamina interactions
The architecture of human chromosomes in interphase nuclei is still largely unknown.
Microscopy studies have indicated that specific regions of chromosomes are located in close …
Microscopy studies have indicated that specific regions of chromosomes are located in close …
Genome sequence, comparative analysis and haplotype structure of the domestic dog
Here we report a high-quality draft genome sequence of the domestic dog (Canis familiaris),
together with a dense map of single nucleotide polymorphisms (SNPs) across breeds. The …
together with a dense map of single nucleotide polymorphisms (SNPs) across breeds. The …
Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
Project management: Fulton Lucinda A. 1 Mardis … - Nature, 2004 - nature.com
We present here a draft genome sequence of the red jungle fowl, Gallus gallus. Because the
chicken is a modern descendant of the dinosaurs and the first non-mammalian amniote to …
chicken is a modern descendant of the dinosaurs and the first non-mammalian amniote to …