Quantitative studies of the structure of proteins in solution by Fourier-transform infrared spectroscopy

JLR Arrondo, A Muga, J Castresana, FM Goñi - Progress in biophysics and …, 1993 - Elsevier
X-ray diffraction was one of the early methods to be used in solving protein conformation.
The technique can give the atomic coordinates of the protein components and therefore …

Prediction of protein structural classes

KC Chou, CT Zhang - Critical reviews in biochemistry and …, 1995 - Taylor & Francis
A protein is usually classified into one of the following five structural classes: α, β, α+ β, α/β,
and ζ (irregular). The structural class of a protein is correlated with its amino acid …

SCOP: a structural classification of proteins database for the investigation of sequences and structures

AG Murzin, SE Brenner, T Hubbard… - Journal of molecular …, 1995 - Elsevier
To facilitate understanding of, and access to, the information available for protein structures,
we have constructed the Structural Classification of Proteins (scop) database. This database …

ECOD: an evolutionary classification of protein domains

H Cheng, RD Schaeffer, Y Liao, LN Kinch… - PLoS computational …, 2014 - journals.plos.org
Understanding the evolution of a protein, including both close and distant relationships,
often reveals insight into its structure and function. Fast and easy access to such up-to-date …

Molten globule and protein folding

OB Ptitsyn - Advances in protein chemistry, 1995 - Elsevier
Publisher Summary This chapter describes the present state of the studies of the molten
globule state and its role in protein folding and physiological processes. Recent data on the …

Prediction of protein folding class using global description of amino acid sequence.

I Dubchak, I Muchnik, SR Holbrook… - Proceedings of the …, 1995 - National Acad Sciences
We present a method for predicting protein folding class based on global protein chain
description and a voting process. Selection of the best descriptors was achieved by a …

Principles of protein− protein interactions: what are the preferred ways for proteins to interact?

O Keskin, A Gursoy, B Ma, R Nussinov - Chemical reviews, 2008 - ACS Publications
Proteins are the working horse of the cellular machinery. They are responsible for diverse
functions ranging from molecular motors to signaling. They catalyze reactions, transport …

Membrane protein folding and oligomerization: the two-stage model

JL Popot, DM Engelman - Biochemistry, 1990 - ACS Publications
Instituí de Biologie Physico-Chimique and College de France, 13 rue Pierre et Marie Curie,
F-75005 Paris, France, and Department of Molecular Biophysicsand Biochemistry, Yale …

[HTML][HTML] Recent advances in developing web-servers for predicting protein attributes

KC Chou, HB Shen - Natural science, 2009 - scirp.org
Recent advance in large-scale genome se-quencing has generated a huge volume of pro-
tein sequences. In order to timely utilize the in-formation hidden in these newly discovered …

Three-dimensional protein structure prediction: Methods and computational strategies

M Dorn, MB e Silva, LS Buriol, LC Lamb - Computational biology and …, 2014 - Elsevier
A long standing problem in structural bioinformatics is to determine the three-dimensional (3-
D) structure of a protein when only a sequence of amino acid residues is given. Many …