A review on machine learning principles for multi-view biological data integration

Y Li, FX Wu, A Ngom - Briefings in bioinformatics, 2018 - academic.oup.com
Driven by high-throughput sequencing techniques, modern genomic and clinical studies are
in a strong need of integrative machine learning models for better use of vast volumes of …

Tensor-based anomaly detection: An interdisciplinary survey

H Fanaee-T, J Gama - Knowledge-based systems, 2016 - Elsevier
Traditional spectral-based methods such as PCA are popular for anomaly detection in a
variety of problems and domains. However, if data includes tensor (multiway) structure (eg …

[HTML][HTML] Limestone: High-throughput candidate phenotype generation via tensor factorization

JC Ho, J Ghosh, SR Steinhubl, WF Stewart… - Journal of biomedical …, 2014 - Elsevier
The rapidly increasing availability of electronic health records (EHRs) from multiple
heterogeneous sources has spearheaded the adoption of data-driven approaches for …

Tensor factorization toward precision medicine

Y Luo, F Wang, P Szolovits - Briefings in bioinformatics, 2017 - academic.oup.com
Precision medicine initiatives come amid the rapid growth in quantity and variety of
biomedical data, which exceeds the capacity of matrix-oriented data representations and …

Sparse representation approaches for the classification of high-dimensional biological data

Y Li, A Ngom - BMC systems biology, 2013 - Springer
Background High-throughput genomic and proteomic data have important applications in
medicine including prevention, diagnosis, treatment, and prognosis of diseases, and …

Smartphone dependence classification using tensor factorization

J Choi, MJ Rho, Y Kim, IH Yook, H Yu, DJ Kim, IY Choi - PloS one, 2017 - journals.plos.org
Excessive smartphone use causes personal and social problems. To address this issue, we
sought to derive usage patterns that were directly correlated with smartphone dependence …

Classification approach based on non-negative least squares

Y Li, A Ngom - Neurocomputing, 2013 - Elsevier
A non-negative least squares classifier is proposed in this paper for classifying under-
complete data. The idea is that unknown samples can be approximated by sparse non …

Orthogonal joint sparse NMF for microarray data analysis

F Esposito, N Gillis, N Del Buono - Journal of mathematical biology, 2019 - Springer
The 3D microarrays, generally known as gene-sample-time microarrays, couple the
information on different time points collected by 2D microarrays that measure gene …

Data integration in machine learning

Y Li, A Ngom - 2015 IEEE International Conference on …, 2015 - ieeexplore.ieee.org
Modern data generated in many fields are in a strong need of integrative machine learning
models in order to better make use of heterogeneous information in decision making and …

Nonnegative least-squares methods for the classification of high-dimensional biological data

Y Li, A Ngom - … /ACM transactions on computational biology and …, 2013 - ieeexplore.ieee.org
Microarray data can be used to detect diseases and predict responses to therapies through
classification models. However, the high dimensionality and low sample size of such data …