Regulation and functions of non-m6A mRNA modifications

H Sun, K Li, C Liu, C Yi - Nature Reviews Molecular Cell Biology, 2023 - nature.com
Nucleobase modifications are prevalent in eukaryotic mRNA and their discovery has
resulted in the emergence of epitranscriptomics as a research field. The most abundant …

A-to-I RNA editing—immune protector and transcriptome diversifier

E Eisenberg, EY Levanon - Nature Reviews Genetics, 2018 - nature.com
Modifications of RNA affect its function and stability. RNA editing is unique among these
modifications because it not only alters the cellular fate of RNA molecules but also alters …

[HTML][HTML] High throughput single cell long-read sequencing analyses of same-cell genotypes and phenotypes in human tumors

CK Shiau, L Lu, R Kieser, K Fukumura, T Pan… - Nature …, 2023 - nature.com
Single-cell nanopore sequencing of full-length mRNAs transforms single-cell multi-omics
studies. However, challenges include high sequencing errors and dependence on short …

The RNA modification landscape in human disease

N Jonkhout, J Tran, MA Smith, N Schonrock, JS Mattick… - Rna, 2017 - rnajournal.cshlp.org
RNA modifications have been historically considered as fine-tuning chemo-structural
features of infrastructural RNAs, such as rRNAs, tRNAs, and snoRNAs. This view has …

Dynamic landscape and evolution of m6A methylation in human

H Zhang, X Shi, T Huang, X Zhao, W Chen… - Nucleic acids …, 2020 - academic.oup.com
Abstract m6A is a prevalent internal modification in mRNAs and has been linked to the
diverse effects on mRNA fate. To explore the landscape and evolution of human m6A, we …

[HTML][HTML] Landscape of adenosine-to-inosine RNA recoding across human tissues

O Gabay, Y Shoshan, E Kopel, U Ben-Zvi… - Nature …, 2022 - nature.com
RNA editing by adenosine deaminases changes the information encoded in the mRNA from
its genomic blueprint. Editing of protein-coding sequences can introduce novel, functionally …

A-to-I editing of coding and non-coding RNAs by ADARs

K Nishikura - Nature reviews Molecular cell biology, 2016 - nature.com
Adenosine deaminases acting on RNA (ADARs) convert adenosine to inosine in double-
stranded RNA. This A-to-I editing occurs not only in protein-coding regions of mRNAs, but …

Dynamic landscape and regulation of RNA editing in mammals

MH Tan, Q Li, R Shanmugam, R Piskol, J Kohler… - Nature, 2017 - nature.com
Abstract Adenosine-to-inosine (A-to-I) RNA editing is a conserved post-transcriptional
mechanism mediated by ADAR enzymes that diversifies the transcriptome by altering …

Epitranscriptome sequencing technologies: decoding RNA modifications

X Li, X Xiong, C Yi - Nature methods, 2017 - nature.com
In recent years, major breakthroughs in RNA-modification-mediated regulation of gene
expression have been made, leading to the emerging field of epitranscriptomics. Our …

Precise RNA editing by recruiting endogenous ADARs with antisense oligonucleotides

T Merkle, S Merz, P Reautschnig, A Blaha, Q Li… - Nature …, 2019 - nature.com
Site-directed RNA editing might provide a safer or more effective alternative to genome
editing in certain clinical scenarios. Until now, RNA editing has relied on overexpression of …