Natural language processing in radiology: a systematic review

E Pons, LMM Braun, MGM Hunink, JA Kors - Radiology, 2016 - pubs.rsna.org
Radiological reporting has generated large quantities of digital content within the electronic
health record, which is potentially a valuable source of information for improving clinical care …

Clinical natural language processing in languages other than English: opportunities and challenges

A Névéol, H Dalianis, S Velupillai, G Savova… - Journal of biomedical …, 2018 - Springer
Background Natural language processing applied to clinical text or aimed at a clinical
outcome has been thriving in recent years. This paper offers the first broad overview of …

[HTML][HTML] Clinical concept extraction: a methodology review

S Fu, D Chen, H He, S Liu, S Moon, KJ Peterson… - Journal of biomedical …, 2020 - Elsevier
Background Concept extraction, a subdomain of natural language processing (NLP) with a
focus on extracting concepts of interest, has been adopted to computationally extract clinical …

Clinical concept and relation extraction using prompt-based machine reading comprehension

C Peng, X Yang, Z Yu, J Bian… - Journal of the …, 2023 - academic.oup.com
Objective To develop a natural language processing system that solves both clinical concept
extraction and relation extraction in a unified prompt-based machine reading …

A comparative analysis of active learning for biomedical text mining

U Naseem, M Khushi, SK Khan, K Shaukat… - Applied System …, 2021 - mdpi.com
An enormous amount of clinical free-text information, such as pathology reports, progress
reports, clinical notes and discharge summaries have been collected at hospitals and …

Model tuning or prompt Tuning? a study of large language models for clinical concept and relation extraction

C Peng, XI Yang, KE Smith, Z Yu, A Chen, J Bian… - Journal of biomedical …, 2024 - Elsevier
Objective To develop soft prompt-based learning architecture for large language models
(LLMs), examine prompt-tuning using frozen/unfrozen LLMs, and assess their abilities in …

The revival of the notes field: leveraging the unstructured content in electronic health records

M Assale, LG Dui, A Cina, A Seveso, F Cabitza - Frontiers in medicine, 2019 - frontiersin.org
Problem: Clinical practice requires the production of a time-and resource-consuming great
amount of notes. They contain relevant information, but their secondary use is almost …

Geoscience keyphrase extraction algorithm using enhanced word embedding

Q Qiu, Z Xie, L Wu, W Li - Expert Systems with Applications, 2019 - Elsevier
A large amount of unstructured textual data about geoscience structures and minerals is
buried in geoscience documents and is unused. Automatic keyphrase extraction provides …

[HTML][HTML] Extracting clinical terms from radiology reports with deep learning

K Sugimoto, T Takeda, JH Oh, S Wada… - Journal of Biomedical …, 2021 - Elsevier
Extracting clinical terms from free-text format radiology reports is a first important step toward
their secondary use. However, there is no general consensus on the kind of terms to be …

Toward complete structured information extraction from radiology reports using machine learning

JM Steinkamp, C Chambers, D Lalevic, HM Zafar… - Journal of digital …, 2019 - Springer
Unstructured and semi-structured radiology reports represent an underutilized trove of
information for machine learning (ML)-based clinical informatics applications, including …