Mechanics and functional consequences of nuclear deformations

Y Kalukula, AD Stephens, J Lammerding… - … reviews Molecular cell …, 2022 - nature.com
As the home of cellular genetic information, the nucleus has a critical role in determining cell
fate and function in response to various signals and stimuli. In addition to biochemical …

Nuclear size and shape control

H Cantwell, G Dey - Seminars in Cell & Developmental Biology, 2022 - Elsevier
The nucleus displays a wide range of sizes and shapes in different species and cell types,
yet its size scaling and many of the key structural constituents that determine its shape are …

Brillouin light scattering anisotropy microscopy for imaging the viscoelastic anisotropy in living cells

H Keshmiri, D Cikes, M Samalova, L Schindler… - Nature …, 2024 - nature.com
Maintaining and modulating mechanical anisotropy is essential for biological processes.
However, how this is achieved at the microscopic scale in living soft matter is not always …

Euchromatin activity enhances segregation and compaction of heterochromatin in the cell nucleus

A Mahajan, W Yan, A Zidovska, D Saintillan… - Physical Review X, 2022 - APS
The large-scale organization of the genome inside the cell nucleus is critical for the cell's
function. Chromatin—the functional form of DNA in cells—serves as a template for active …

Interphase chromatin undergoes a local sol-gel transition upon cell differentiation

I Eshghi, JA Eaton, A Zidovska - Physical review letters, 2021 - APS
Cell differentiation, the process by which stem cells become specialized cells, is associated
with chromatin reorganization inside the cell nucleus. Here, we measure the chromatin …

HP1-driven phase separation recapitulates the thermodynamics and kinetics of heterochromatin condensate formation

MMC Tortora, LD Brennan… - Proceedings of the …, 2023 - National Acad Sciences
The spatial segregation of pericentromeric heterochromatin (PCH) into distinct, membrane-
less nuclear compartments involves the binding of Heterochromatin Protein 1 (HP1) to …

Activity-driven phase transition causes coherent flows of chromatin

I Eshghi, A Zidovska, AY Grosberg - Physical Review Letters, 2023 - APS
We discover a new type of nonequilibrium phase transition in a model of chromatin
dynamics, which accounts for the coherent motions that have been observed in experiment …

Probe-free optical chromatin deformation and measurement of differential mechanical properties in the nucleus

B Seelbinder, S Wagner, M Jain, E Erben, S Klykov… - ELife, 2024 - elifesciences.org
The nucleus is highly organized to facilitate coordinated gene transcription. Measuring the
rheological properties of the nucleus and its sub-compartments will be crucial to understand …

Conformations, correlations, and instabilities of a flexible fiber in an active fluid

S Weady, DB Stein, A Zidovska, MJ Shelley - Physical Review Fluids, 2024 - APS
Fluid-structure interactions between active and passive components are important for many
biological systems to function. A particular example is chromatin in the cell nucleus, where …

A liquid state perspective on dynamics of chromatin compartments

R Laghmach, M Di Pierro, D Potoyan - Frontiers in Molecular …, 2022 - frontiersin.org
The interior of the eukaryotic cell nucleus has a crowded and heterogeneous environment
packed with chromatin polymers, regulatory proteins, and RNA molecules. Chromatin …