[HTML][HTML] Environmental DNA metabarcoding for benthic monitoring: A review of sediment sampling and DNA extraction methods

J Pawlowski, K Bruce, K Panksep, FI Aguirre… - Science of the Total …, 2022 - Elsevier
Environmental DNA (eDNA) metabarcoding (parallel sequencing of DNA/RNA for
identification of whole communities within a targeted group) is revolutionizing the field of …

[HTML][HTML] Towards the optimization of eDNA/eRNA sampling technologies for marine biosecurity surveillance

HA Bowers, X Pochon, U von Ammon, N Gemmell… - Water, 2021 - mdpi.com
The field of eDNA is growing exponentially in response to the need for detecting rare and
invasive species for management and conservation decisions. Developing technologies and …

Navigating the seven challenges of taxonomic reference databases in metabarcoding analyses

F Keck, M Couton, F Altermatt - Molecular Ecology Resources, 2023 - Wiley Online Library
Assessment of biodiversity using metabarcoding data, such as from bulk or environmental
DNA sampling, is becoming increasingly relevant in ecology, biodiversity sciences and …

[HTML][HTML] Status and trends in the rate of introduction of marine non-indigenous species in European seas

A Zenetos, K Tsiamis, M Galanidi, N Carvalho… - Diversity, 2022 - mdpi.com
Diversity | Free Full-Text | Status and Trends in the Rate of Introduction of Marine Non-Indigenous
Species in European Seas Next Article in Journal Dietary Variation Is Driven by Landscape …

Best practice guidelines for environmental DNA biomonitoring in Australia and New Zealand

M De Brauwer, LJ Clarke, A Chariton… - Environmental …, 2023 - Wiley Online Library
Environmental DNA (eDNA)‐based methods are increasingly used by government agencies
to detect pests and threatened species, and for broader biodiversity monitoring. Given rapid …

Towards reproducible metabarcoding data: Lessons from an international cross‐laboratory experiment

A Zaiko, P Greenfield, C Abbott… - Molecular Ecology …, 2022 - Wiley Online Library
Advances in high‐throughput sequencing (HTS) are revolutionizing monitoring in marine
environments by enabling rapid, accurate and holistic detection of species within complex …

[HTML][HTML] Developing a non-destructive metabarcoding protocol for detection of pest insects in bulk trap catches

J Batovska, AM Piper, I Valenzuela, JP Cunningham… - Scientific Reports, 2021 - nature.com
Metabarcoding has the potential to revolutionise insect surveillance by providing high-
throughput and cost-effective species identification of all specimens within mixed trap …

Assigning cause for emerging diseases of aquatic organisms

KS Hutson, IC Davidson, J Bennett, R Poulin… - Trends in …, 2023 - cell.com
Resolving the cause of disease (= aetiology) in aquatic organisms is a challenging but
essential goal, heightened by increasing disease prevalence in a changing climate and an …

[HTML][HTML] Seeing through sedimented waters: environmental DNA reduces the phantom diversity of sharks and rays in turbid marine habitats

YCA Ip, JJM Chang, KKP Lim, Z Jaafar… - BMC Ecology and …, 2021 - Springer
Background Sharks and rays are some of the most threatened marine taxa due to the high
levels of bycatch and significant demand for meat and fin-related products in many Asian …

Water eDNA metabarcoding is effective in detecting non-native species in marinas, but detection errors still hinder its use for passive monitoring

M Couton, L Lévêque, C Daguin-Thiébaut, T Comtet… - Biofouling, 2022 - Taylor & Francis
Marinas are high-priority targets for marine non-indigenous species (NIS), where they
compose a large portion of the biofouling communities. The practicality of water samples …