Principles of genetic circuit design

JAN Brophy, CA Voigt - Nature methods, 2014 - nature.com
Cells navigate environments, communicate and build complex patterns by initiating gene
expression in response to specific signals. Engineers seek to harness this capability to …

Synthetic biology: applications come of age

AS Khalil, JJ Collins - Nature Reviews Genetics, 2010 - nature.com
Synthetic biology is bringing together engineers and biologists to design and build novel
biomolecular components, networks and pathways, and to use these constructs to rewire …

Escherichia coli “Marionette” strains with 12 highly optimized small-molecule sensors

AJ Meyer, TH Segall-Shapiro, E Glassey… - Nature chemical …, 2019 - nature.com
Cellular processes are carried out by many genes, and their study and optimization requires
multiple levers by which they can be independently controlled. The most common method is …

'Deadman'and'Passcode'microbial kill switches for bacterial containment

CTY Chan, JW Lee, DE Cameron, CJ Bashor… - Nature chemical …, 2016 - nature.com
Biocontainment systems that couple environmental sensing with circuit-based control of cell
viability could be used to prevent escape of genetically modified microbes into the …

The Standard European Vector Architecture (SEVA): a coherent platform for the analysis and deployment of complex prokaryotic phenotypes

R Silva-Rocha, E Martínez-García, B Calles… - Nucleic acids …, 2013 - academic.oup.com
Abstract The 'Standard European Vector Architecture'database (SEVA-DB, http://seva. cnb.
csic. es) was conceived as a user-friendly, web-based resource and a material clone …

Engineering dynamic pathway regulation using stress-response promoters

RH Dahl, F Zhang, J Alonso-Gutierrez, E Baidoo… - Nature …, 2013 - nature.com
Heterologous pathways used in metabolic engineering may produce intermediates toxic to
the cell. Dynamic control of pathway enzymes could prevent the accumulation of these …

Engineering the perfect (bacterial) cancer therapy

NS Forbes - Nature Reviews Cancer, 2010 - nature.com
Bacterial therapies possess many unique mechanisms for treating cancer that are
unachievable with standard methods. Bacteria can specifically target tumours, actively …

Engineering microbial consortia: a new frontier in synthetic biology

K Brenner, L You, FH Arnold - Trends in biotechnology, 2008 - cell.com
Microbial consortia are ubiquitous in nature and are implicated in processes of great
importance to humans, from environmental remediation and wastewater treatment to …

Ribozyme-based insulator parts buffer synthetic circuits from genetic context

C Lou, B Stanton, YJ Chen, B Munsky, CA Voigt - Nature biotechnology, 2012 - nature.com
Synthetic genetic programs are built from circuits that integrate sensors and implement
temporal control of gene expression,,,. Transcriptional circuits are layered by using …

An E. coli Cell-Free Expression Toolbox: Application to Synthetic Gene Circuits and Artificial Cells

J Shin, V Noireaux - ACS synthetic biology, 2012 - ACS Publications
Cell-free protein synthesis is becoming a powerful technique to construct and to study
complex informational processes in vitro. Engineering synthetic gene circuits in a test tube …