Intelligent host engineering for metabolic flux optimisation in biotechnology

LJ Munro, DB Kell - Biochemical Journal, 2021 - portlandpress.com
Optimising the function of a protein of length N amino acids by directed evolution involves
navigating a 'search space'of possible sequences of some 20 N. Optimising the expression …

Chimeric MerR-Family Regulators and Logic Elements for the Design of Metal Sensitive Genetic Circuits in Bacillus subtilis

JS Ghataora, S Gebhard, BJ Reeksting - ACS Synthetic Biology, 2023 - ACS Publications
Whole-cell biosensors are emerging as promising tools for monitoring environmental
pollutants such as heavy metals. These sensors constitute a genetic circuit comprising a …

Optimizing multicopy chromosomal integration for stable high-performing strains

F Du, Z Li, X Li, D Zhang, F Zhang, Z Zhang… - Nature Chemical …, 2024 - nature.com
The copy number of genes in chromosomes can be modified by chromosomal integration to
construct efficient microbial cell factories but the resulting genetic systems are prone to …

Creation of Architecturally Minimal Transcriptionally Activating Riboswitches Responsive to Theophylline Reveals an Unconventional Design Strategy

W Cui, Q Lin, Y Wu, X Wang, Y Zhang, X Lin… - ACS Synthetic …, 2023 - ACS Publications
Riboswitches are noncoding RNA switches that are largely utilized in bacteria and play a
significant role in synthetic biology. Nonetheless, their natural counterparts possess lengthy …

[HTML][HTML] Sequence and thermodynamic characteristics of terminators revealed by FlowSeq and the discrimination of terminators strength

W Zhai, Y Duan, X Zhang, G Xu, H Li, J Shi, Z Xu… - Synthetic and Systems …, 2022 - Elsevier
The intrinsic terminator in prokaryotic forms secondary RNA structure and terminates the
transcription. However, leaking transcription is common due to varied terminator strength …

Autoinduction Expression Modules for Regulating Gene Expression in Bacillus subtilis

K Xu, Y Tong, Y Li, J Tao, S Rao, J Li… - ACS Synthetic …, 2022 - ACS Publications
Although quorum sensing (QS) promoters that can autonomously activate gene expression
have been identified and engineered in Bacillus subtilis, researchers focus on quantifying …

Development and Application of Transcription Terminators for Polyhydroxylkanoates Production in Halophilic Halomonas bluephagenesis TD01

M Xu, Y Chang, Y Zhang, W Wang, J Hong… - Frontiers in …, 2022 - frontiersin.org
Halomonas bluephagenesis TD01 is one of the ideal chassis for low-cost industrial
production based on “Next Generation Industrial Biotechnology,” yet the limited genetically …

Internal transcription terminators control stoichiometry of ABC transporters in Cellulolytic clostridia

S Wu, M You, N Wang, Z Ren, C Xu - Microbiology Spectrum, 2022 - Am Soc Microbiol
The extracellular substrate-binding proteins (SBPs) of ATP-binding cassette (ABC) importers
tend to be expressed in excess relative to their cognate translocators, but how the …

[HTML][HTML] Regulatory significance of terminator: A systematic approach for dissecting terminator-mediated enhancement of upstream mRNA stability

JW Ren, JP Zhang, ZL Mei, JY Shao, GQ Xu… - Synthetic and Systems …, 2025 - Elsevier
The primary function of terminators is to terminate transcription in gene expression. Although
some studies have suggested that terminators also contribute positively to upstream gene …

Host-Dependent Improvement of GFP Expression in Pseudomonas putida KT2440 Using Terminators of Metagenomic Origin

GMV de Siqueira, ME Guazzaroni - ACS Synthetic Biology, 2023 - ACS Publications
Transcriptional terminators are key players in the flow of genetic information, but are often
overlooked in circuit design. In this work, we used the Standard European Vector …