Transcriptional network dynamics in early T cell development

B Shin, SJ Chang, BW MacNabb… - Journal of Experimental …, 2024 - rupress.org
The rate at which cells enter the T cell pathway depends not only on the immigration of
hematopoietic precursors into the strong Notch signaling environment of the thymus but also …

Multi-modular structure of the gene regulatory network for specification and commitment of murine T cells

B Shin, EV Rothenberg - Frontiers in Immunology, 2023 - frontiersin.org
T cells develop from multipotent progenitors by a gradual process dependent on intrathymic
Notch signaling and coupled with extensive proliferation. The stages leading them to T-cell …

Speed and navigation control of thymocyte development by the fetal T‐cell gene regulatory network

BW MacNabb, EV Rothenberg - Immunological reviews, 2023 - Wiley Online Library
T‐cell differentiation is a tightly regulated developmental program governed by interactions
between transcription factors (TFs) and chromatin landscapes and affected by signals …

PU. 1 and BCL11B sequentially cooperate with RUNX1 to anchor mSWI/SNF to poise the T cell effector landscape

N Gamble, A Bradu, JA Caldwell, J McKeever… - Nature …, 2024 - nature.com
Adaptive immunity relies on specialized effector functions elicited by lymphocytes, yet how
antigen recognition activates appropriate effector responses through nonspecific signaling …

Novel biomarkers: the RUNX family as prognostic predictors in colorectal cancer

Y Liu, J Chen, A Li, Y Wu, J Ge, M Yuan, B Xu… - Frontiers in …, 2024 - frontiersin.org
While biomarkers have been shown to enhance the prognosis of patients with colorectal
cancer (CRC) compared to conventional treatments, there is a pressing need to discover …

T-cell commitment inheritance—an agent-based multi-scale model

E Andersson, EV Rothenberg, C Peterson… - npj Systems Biology and …, 2024 - nature.com
T-cell development provides an excellent model system for studying lineage commitment
from a multipotent progenitor. The intrathymic development process has been thoroughly …

Environmental and molecular regulation of diapause formation in a scyphozoan jellyfish

Y Li, P Xu, T Sun, S Peng, F Wang, L Wang… - Molecular …, 2024 - Wiley Online Library
Understanding the mechanisms underlying diapause formation is crucial for gaining insight
into adaptive survival strategies across various species. In this study, we aimed to uncover …

A timed epigenetic switch balances T and ILC lineage proportions in the thymus

NA Pease, KM Denecke, L Chen, PH Gerges… - …, 2024 - journals.biologists.com
How multipotent progenitors give rise to multiple cell types in defined numbers is a central
question in developmental biology. Epigenetic switches, acting at single gene loci, can …

[HTML][HTML] Ever-evolving insights into the cellular and molecular drivers of lymphoid cell development

VL Tran, MLR Haltalli, J Li, DS Lin, M Yamashita… - Experimental …, 2024 - Elsevier
Lymphocytes play a critical role in adaptive immunity and defense mechanisms, but the
molecular mechanisms by which hematopoietic stem and progenitor cells differentiate into T …

T-cell commitment inheritance–an agent-based multi-scale model

V Olariu, E Andersson, E Rothenberg, C Peterson - 2023 - researchsquare.com
T-cell development provides an excellent model system for studying lineage commitment
from a multipotent progenitor. The intrathymic development process has been thoroughly …